Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | GFX43_RS00695 | Genome accession | NZ_CP046448 |
| Coordinates | 115647..115937 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain ZD01 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 110647..120937
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFX43_RS00680 (GFX43_000680) | yabE | 110842..112155 (-) | 1314 | WP_015382562.1 | ubiquitin-like domain-containing protein | - |
| GFX43_RS00685 (GFX43_000685) | dayD | 112311..113078 (-) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| GFX43_RS00690 (GFX43_000690) | metG | 113158..115152 (-) | 1995 | WP_015382561.1 | methionine--tRNA ligase | - |
| GFX43_RS00695 (GFX43_000695) | abrB | 115647..115937 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| GFX43_RS00700 (GFX43_000700) | rsmI | 115986..116864 (-) | 879 | WP_041517603.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GFX43_RS00705 (GFX43_000705) | yazA | 116839..117138 (-) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| GFX43_RS00710 (GFX43_000710) | trmNF | 117125..117868 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| GFX43_RS00715 (GFX43_000715) | yabA | 117927..118286 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| GFX43_RS00720 (GFX43_000720) | ricT | 118301..119128 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| GFX43_RS00725 (GFX43_000725) | holB | 119131..120120 (-) | 990 | WP_015482689.1 | DNA polymerase III subunit delta' | - |
| GFX43_RS00730 (GFX43_000730) | yaaR | 120132..120572 (-) | 441 | WP_015382556.1 | YaaR family protein | - |
| GFX43_RS00735 (GFX43_000735) | darA | 120585..120914 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=404361 GFX43_RS00695 WP_003226760.1 115647..115937(+) (abrB) [Bacillus subtilis strain ZD01]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=404361 GFX43_RS00695 WP_003226760.1 115647..115937(+) (abrB) [Bacillus subtilis strain ZD01]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |