Detailed information NTG0040435

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SPYALAB49_RS08230
• Genome accession: NC_017596
• Coordinates: 1637158..1638426 (+)
• Length: 422 a.a.
• NCBI ID: WP_014635739.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes Alab49
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1632158..1643426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPYALAB49_RS08215 (SPYALAB49_001682)	-	1632611..1634584 (+)	1974	WP_014635736.1	amidase family protein	-
SPYALAB49_RS08220 (SPYALAB49_001683)	pabB	1634769..1636526 (+)	1758	WP_014635737.1	aminodeoxychorismate synthase component I	-
SPYALAB49_RS08225 (SPYALAB49_001684)	-	1636559..1637125 (+)	567	WP_014635738.1	aminodeoxychorismate/anthranilate synthase component II	-
SPYALAB49_RS08230 (SPYALAB49_001685)	rarA	1637158..1638426 (+)	1269	WP_014635739.1	replication-associated recombination protein A	Machinery gene
SPYALAB49_RS08240	smeZ	1638995..1639699 (+)	705	WP_041174301.1	streptococcal mitogenic exotoxin SmeZ	-
SPYALAB49_RS08245 (SPYALAB49_001688)	-	1640427..1642055 (+)	1629	WP_014635741.1	ABC transporter substrate-binding protein	-
SPYALAB49_RS08250 (SPYALAB49_001689)	-	1642168..1643145 (+)	978	WP_014635742.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46641.06 Da
• Isoelectric Point: 6.3774

>NTDB_id=40435 SPYALAB49_RS08230 WP_014635739.1 1637158..1638426(+) (rarA) [Streptococcus pyogenes Alab49]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETIENSLQRSYITMDKNGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHTYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=40435 SPYALAB49_RS08230 WP_014635739.1 1637158..1638426(+) (rarA) [Streptococcus pyogenes Alab49]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACCCCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATAGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAAGCTATTCGCGGCTCCGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCCCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACACCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.472	98.815	0.588