Detailed information NTG0402489

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FOC54_RS10645
• Genome accession: NZ_CP046306
• Coordinates: 2079449..2081872 (+)
• Length: 807 a.a.
• NCBI ID: WP_155975605.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain FDAARGOS_746
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2074449..2086872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC54_RS10615 (FOC54_10615)	cymR	2074456..2074878 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
FOC54_RS10620 (FOC54_10620)	-	2074988..2075131 (+)	144	WP_017176172.1	SAS049 family protein	-
FOC54_RS10625 (FOC54_10625)	-	2075230..2076234 (-)	1005	WP_049336022.1	LLM class flavin-dependent oxidoreductase	-
FOC54_RS10630 (FOC54_10630)	-	2076434..2077573 (+)	1140	WP_155975603.1	cysteine desulfurase family protein	-
FOC54_RS10635 (FOC54_10635)	mnmA	2077577..2078689 (+)	1113	WP_064207356.1	tRNA 2-thiouridine(34) synthase MnmA	-
FOC54_RS10640 (FOC54_10640)	-	2078776..2079447 (+)	672	WP_155975604.1	tetratricopeptide repeat protein	-
FOC54_RS10645 (FOC54_10645)	recD2	2079449..2081872 (+)	2424	WP_155975605.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FOC54_RS10650 (FOC54_10650)	alaS	2082152..2084782 (+)	2631	WP_155975606.1	alanine--tRNA ligase	-
FOC54_RS10655 (FOC54_10655)	-	2084847..2085107 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
FOC54_RS10660 (FOC54_10660)	ruvX	2085108..2085536 (+)	429	WP_002455257.1	Holliday junction resolvase RuvX	-
FOC54_RS10665 (FOC54_10665)	-	2085551..2085859 (+)	309	WP_064207352.1	DUF1292 domain-containing protein	-
FOC54_RS10670 (FOC54_10670)	-	2086119..2086754 (+)	636	WP_002448992.1	O-methyltransferase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91707.29 Da
• Isoelectric Point: 4.8582

>NTDB_id=402489 FOC54_RS10645 WP_155975605.1 2079449..2081872(+) (recD2) [Staphylococcus hominis strain FDAARGOS_746]
MPNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILKNSHVAIPSLYYSELKSVQNLYRIKTYKNHFKII
EQSDLQIHIGELEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHEPIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDITFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLVVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEQINIDDKDDNNAVEHITLSEETIYQINPMINMGNVS
PYDFVEH

Nucleotide

• Length: 2424 bp

>NTDB_id=402489 FOC54_RS10645 WP_155975605.1 2079449..2081872(+) (recD2) [Staphylococcus hominis strain FDAARGOS_746]
ATGCCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGATTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAATCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCTATGGCGATTTATCAATTCTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACGTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAAAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAAAACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAACTAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTGACTGGAGGTCCAGGAACAGGTAAGACAACTGTTATTAAAGGGA
TTGTAGAATTATATGCTGAAATTCATGGTCTATCTCTTAAGTATTCTGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGAGCATCAAAGCGTTTACAAGAATCAACTGGCTTAGAGGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAGAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCACCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATCATTCTAGTAGGGGATGAAGAT
CAATTGCCATCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGCATTATTGACTTAGCGCATCGCATGAAACATCATGAGCCAATAGATATTACAA
AACGTTATCATGATAGAAGTTTTATTCATTGTAATGTAGAACAAATTCCAACTGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAACAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAACGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTCAATCGACCCAATGACAATATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTT
TGGGCTAAAGAAAATGCACTTAATAAAGATGTACTGGTTGTCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGGTCAGAATTTCCTATTGTCATTATGCCTA
TTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGATCCAAAGGCATTTGACATTGCCTTAAATACGCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGATGTAGAAGAGAATGATGAACAGATAAATATAGATGATAAAGATGATA
ATAATGCAGTTGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCG
CCTTACGACTTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (340-545)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.502	99.628	0.493