Detailed information NTG0402222

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: HUT14_RS05835
• Genome accession: NZ_CP054939
• Coordinates: 1295177..1296532 (-)
• Length: 451 a.a.
• NCBI ID: WP_121545240.1
• Uniprot ID: A0A494UKI8
• Organism: Streptomyces sp. NA02536
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1290177..1301532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUT14_RS05815 (HUT14_05815)	alaS	1290555..1293227 (-)	2673	WP_121545239.1	alanine--tRNA ligase	-
HUT14_RS05820 (HUT14_05820)	-	1293227..1293598 (-)	372	WP_004933918.1	hypothetical protein	-
HUT14_RS05825 (HUT14_05825)	-	1293606..1294058 (-)	453	WP_176116618.1	DUF948 domain-containing protein	-
HUT14_RS05830 (HUT14_05830)	rpsD	1294261..1294875 (-)	615	WP_004933912.1	30S ribosomal protein S4	-
HUT14_RS05835 (HUT14_05835)	rarA	1295177..1296532 (-)	1356	WP_121545240.1	replication-associated recombination protein A	Machinery gene
HUT14_RS05840 (HUT14_05840)	-	1296576..1297244 (-)	669	WP_121545241.1	vitamin K epoxide reductase family protein	-
HUT14_RS05845 (HUT14_05845)	hisS	1297504..1298766 (-)	1263	WP_176116619.1	histidine--tRNA ligase	-
HUT14_RS05850 (HUT14_05850)	-	1298778..1299485 (-)	708	WP_004933899.1	MBL fold metallo-hydrolase	-
HUT14_RS05855 (HUT14_05855)	-	1299670..1300491 (+)	822	WP_176116621.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48306.60 Da
• Isoelectric Point: 6.3808

>NTDB_id=402222 HUT14_RS05835 WP_121545240.1 1295177..1296532(-) (rarA) [Streptomyces sp. NA02536]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGASGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGYGQETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDIRDLLRRALTDERGLKGAVTLPDDTTDHLQRIAGGDARRALTALEAAAGAALDKGEAE
ITLATLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
SVAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALDDVRKGLAGPVPSHLRDSHYKGATKLGHGKGYTY
PHDLPEGIAAQQYAPDALKDREYYEPTRHGAEARYADAVEWTRKHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=402222 HUT14_RS05835 WP_121545240.1 1295177..1296532(-) (rarA) [Streptomyces sp. NA02536]
GTGGAGCCCGACCTGTTCACCGCCGCAGCAGAAGAACGCCAGGAGAAGGACCCGACCGGCAGCCCCCTGGCGGTCCGGAT
GCGCCCGCGCACCCTCGACGAGGTGGTGGGCCAGCAGCACCTGCTGAAGCCGGGCTCCCCCTTGCGCAGACTGGTCGGCG
AGGGCGCCTCGGGCCCCGCGGGTCCCTCCTCGGTGATCCTCTGGGGCCCGCCCGGCACCGGCAAGACCACCCTGGCCTAT
GTCGTCTCCAAGGCCACCAACAAGCGTTTCGTGGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCTCCGGCGGGTACGGCCAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CACAGCAGGACTCCCTGCTGCCCGCCGTGGAGAACCGCTGGGTCACCCTGATCGCCGCGACCACCGAGAACCCCTACTTC
TCGGTCATCTCCCCGCTGCTCTCCCGCTCCCTGCTGCTCACCCTCGAACCGCTCACCGACGACGACATCCGCGACCTGCT
GCGGCGCGCCCTCACCGACGAGCGGGGCCTGAAGGGTGCCGTCACCCTCCCCGACGACACCACGGACCACCTCCAGCGGA
TCGCGGGCGGCGACGCCCGCCGCGCGCTCACCGCCCTGGAGGCCGCCGCCGGGGCCGCCCTCGACAAGGGCGAGGCGGAG
ATCACCCTGGCCACCCTGGAGGAGACGGTCGACCGGGCGGCGGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGCGGCTCCGACGTGGACGCAGCCCTGCACTACCTGGCCCGCATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGCCGGCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAACGCGCTG
TCCGTCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTCGCCCCCAAGTCCAACGCGGCCACCACGGCGATCGGCGCCGCGCTGGACGACGTACGCAAGGGACTGG
CCGGGCCGGTGCCCTCCCACCTGCGGGACAGCCATTACAAGGGCGCGACGAAACTCGGGCACGGGAAGGGCTACACCTAC
CCGCACGACCTGCCCGAGGGCATCGCCGCACAGCAGTACGCGCCGGACGCCCTCAAGGACCGCGAGTACTACGAGCCCAC
CCGGCACGGCGCGGAGGCGAGATACGCGGACGCGGTGGAGTGGACCAGGAAACACCTCGGTCGGAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

3D structure

• AlphaFold DB: A0A494UKI8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.573	96.009	0.428