Detailed information NTG0402203

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: HUT15_RS29595
• Genome accession: NZ_CP054920
• Coordinates: 6654006..6655361 (+)
• Length: 451 a.a.
• NCBI ID: WP_165285191.1
• Uniprot ID: -
• Organism: Streptomyces sp. NA03103
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6649006..6660361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUT15_RS29575 (HUT15_29570)	-	6650079..6650915 (-)	837	WP_134653290.1	peptidylprolyl isomerase	-
HUT15_RS29580 (HUT15_29575)	-	6651099..6651806 (+)	708	WP_176155658.1	MBL fold metallo-hydrolase	-
HUT15_RS29585 (HUT15_29580)	hisS	6651818..6653080 (+)	1263	WP_125633205.1	histidine--tRNA ligase	-
HUT15_RS29590 (HUT15_29585)	-	6653274..6653936 (+)	663	WP_102927923.1	vitamin K epoxide reductase family protein	-
HUT15_RS29595 (HUT15_29590)	rarA	6654006..6655361 (+)	1356	WP_165285191.1	replication-associated recombination protein A	Machinery gene
HUT15_RS29600 (HUT15_29595)	rpsD	6655657..6656271 (+)	615	WP_030185023.1	30S ribosomal protein S4	-
HUT15_RS29605 (HUT15_29600)	-	6656303..6658498 (-)	2196	WP_164713043.1	AAA family ATPase	-
HUT15_RS29610 (HUT15_29605)	-	6658666..6659115 (+)	450	WP_102930884.1	DUF948 domain-containing protein	-
HUT15_RS29615 (HUT15_29610)	-	6659123..6659485 (+)	363	WP_125633211.1	DUF6167 family protein	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48134.50 Da
• Isoelectric Point: 6.4503

>NTDB_id=402203 HUT15_RS29595 WP_165285191.1 6654006..6655361(+) (rarA) [Streptomyces sp. NA03103]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGASGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDLRGLLRRALTDERGLKGALALPEDTEEHLLRIAGGDARRALTALEAAAGAALDKGETE
IGLTTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
QIAVAAAQAVAMIGFPEASLTLSHATIALALAPKSNAATTAIGAALDDVRKGHAGPVPAHLRDSHYKGAGKLGHGQGYVY
PHDLPEGIAAQQYAPDGLKDRTYYTPTRHGAEARYADAVEWTRGHLGRKPS

Nucleotide

• Length: 1356 bp

>NTDB_id=402203 HUT15_RS29595 WP_165285191.1 6654006..6655361(+) (rarA) [Streptomyces sp. NA03103]
GTGGAGCCCGACCTGTTCACCGCCGCAGCCGAAGAACGCCAGGAGAAGGACCCGACCGGCAGCCCCCTCGCCGTGCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTGGGCCAGCAGCACCTGCTCAAGCCCGGATCCCCCCTGCGCCGCCTGGTCGGCG
AGGGCGCGTCCGGCCCCGCGGGGCCGTCCTCGGTCATCCTCTGGGGCCCGCCGGGCACCGGCAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGGTTCGTGGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGTGCGGTCAT
CGACGGCGCCCGCCGCGCCGTCGGCGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAACCCCTCACCGACGACGACCTCCGGGGCCTGCT
GCGCCGCGCCCTGACCGACGAGCGGGGCCTCAAGGGCGCCCTCGCCCTCCCCGAGGACACCGAGGAGCACCTGCTGCGCA
TCGCCGGCGGCGACGCCCGGCGCGCGCTGACCGCGCTGGAGGCCGCCGCCGGGGCCGCGCTCGACAAGGGCGAGACGGAG
ATCGGCCTGACCACGCTGGAGGAGACGGTCGACCGGGCCGCGGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGCGGTTCCGACGTCGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGGCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGATCCGAACGCACTG
CAGATCGCCGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCTCCCTCACCCTCAGCCACGCCACCAT
CGCCCTGGCCCTCGCCCCCAAGTCCAACGCGGCGACCACCGCCATCGGCGCCGCCCTGGACGACGTGCGCAAGGGCCACG
CCGGCCCGGTCCCCGCACACCTGCGCGACAGCCACTACAAGGGCGCCGGCAAGCTGGGGCACGGCCAGGGGTACGTGTAC
CCGCACGACCTGCCCGAGGGCATCGCCGCCCAGCAGTACGCGCCGGACGGGCTCAAGGACCGCACGTACTACACGCCGAC
CCGGCACGGCGCCGAGGCCCGGTACGCGGACGCCGTGGAGTGGACCCGCGGGCACCTCGGTCGCAAGCCCTCCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.521	91.574	0.417