Detailed information NTG0402071

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: HUT18_RS03065
• Genome accession: NZ_CP054918
• Coordinates: 793514..794902 (-)
• Length: 462 a.a.
• NCBI ID: WP_176097584.1
• Uniprot ID: -
• Organism: Streptomyces sp. NA04227
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 788514..799902

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUT18_RS03045 (HUT18_03045)	alaS	788679..791348 (-)	2670	WP_176097570.1	alanine--tRNA ligase	-
HUT18_RS03050 (HUT18_03050)	-	791348..791692 (-)	345	WP_176097572.1	DUF6167 family protein	-
HUT18_RS03055 (HUT18_03055)	-	791700..792161 (-)	462	WP_176097574.1	DUF948 domain-containing protein	-
HUT18_RS03060 (HUT18_03060)	rpsD	792475..793089 (-)	615	WP_176097582.1	30S ribosomal protein S4	-
HUT18_RS03065 (HUT18_03065)	rarA	793514..794902 (-)	1389	WP_176097584.1	replication-associated recombination protein A	Machinery gene
HUT18_RS03070 (HUT18_03070)	-	795010..795657 (-)	648	WP_254878406.1	vitamin K epoxide reductase family protein	-
HUT18_RS03075 (HUT18_03075)	hisS	795808..797073 (-)	1266	WP_176097587.1	histidine--tRNA ligase	-
HUT18_RS03080 (HUT18_03080)	-	797084..797797 (-)	714	WP_176097589.1	MBL fold metallo-hydrolase	-
HUT18_RS03085 (HUT18_03085)	-	797990..798784 (+)	795	WP_176097591.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 48895.34 Da
• Isoelectric Point: 6.4430

>NTDB_id=402071 HUT18_RS03065 WP_176097584.1 793514..794902(-) (rarA) [Streptomyces sp. NA04227]
MEPDLFTAAAEDRQEKDPASSPLAVRMRPRILDEVVGQQHLLKPGSPLRRLVGEGGGGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRATGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDEDLRGLLRRALTDERGLGGAVTLPEDAEAHLLRIAGGDARRALTALEAGAGSALAKGEGE
ITLSTLEDSVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPTAL
PIAVAAAQAVALIGFPEAALTLSHATIALALAPKSNAATTAISAALEDVRKGLTGPVPPHLRDGHYKGAAKLGHAQGYVY
PHDVPGGIAAQQYAPDALHGKEYYRPTRYGAEARYADVVERVRGRLTEGRGGEGGRGSEDRA

Nucleotide

• Length: 1389 bp

>NTDB_id=402071 HUT18_RS03065 WP_176097584.1 793514..794902(-) (rarA) [Streptomyces sp. NA04227]
GTGGAGCCCGATCTGTTCACCGCCGCCGCCGAGGACCGCCAGGAGAAGGACCCGGCGAGCAGTCCGCTCGCCGTCCGTAT
GCGCCCGCGCATCCTGGACGAGGTCGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCGCCGCTGCGCCGCCTGGTCGGCG
AGGGCGGCGGCGGGCCCGCGGGCCCGTCGTCGGTGATCCTCTGGGGGCCGCCGGGCACCGGCAAGACCACCCTCGCGTAC
GTGGTCTCCAAGGCCACCAACAAACGCTTCGTGGAGCTCTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGGGCCGTCAT
CGACGGGGCCCGGCGCGCCACCGGCGGCTACGGCAAGGAGACGGTCCTCTTCCTGGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCGCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTGCTGCTCACCCTCGAACCGCTCACCGACGAGGATCTGCGCGGACTGCT
GCGCCGCGCGCTCACCGACGAGCGCGGGCTCGGCGGGGCGGTGACCCTGCCCGAGGACGCCGAGGCGCATCTGCTGCGCA
TCGCGGGCGGCGACGCGCGCCGTGCGCTGACCGCGCTGGAGGCGGGCGCGGGTTCGGCGCTCGCCAAGGGCGAGGGCGAG
ATAACCCTGTCCACCCTGGAGGACTCCGTCGACCGCGCGGCGGTCAAGTACGACCGGGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCGATCCGGGGCTCGGACGTGGACGCCGCCCTGCACTATCTGGCCCGGATGATCGAGGCGG
GCGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCGGCCAGCGAGGACATCGGCCTGGCCGACCCCACCGCCCTG
CCCATCGCGGTGGCCGCCGCCCAGGCCGTGGCCCTGATCGGCTTCCCCGAGGCGGCGCTCACCCTCAGCCACGCCACCAT
CGCGCTGGCCCTGGCGCCCAAGTCGAACGCCGCGACCACCGCCATCTCGGCCGCCCTGGAGGACGTACGCAAGGGCCTGA
CCGGCCCCGTGCCGCCACACCTGCGCGACGGCCACTACAAGGGCGCCGCCAAACTCGGCCACGCCCAGGGCTACGTGTAT
CCGCACGACGTCCCCGGCGGAATCGCCGCCCAGCAGTACGCCCCCGACGCCCTGCACGGCAAGGAGTACTACCGCCCGAC
GCGGTACGGCGCGGAGGCGCGGTACGCCGATGTCGTCGAGCGGGTGCGCGGGCGGCTGACCGAGGGGCGCGGCGGCGAGG
GGGGCCGTGGCTCCGAGGACCGGGCGTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.78	93.29	0.418