Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HUT19_RS18190 Genome accession   NZ_CP054916
Coordinates   4213914..4215656 (-) Length   580 a.a.
NCBI ID   WP_176181500.1    Uniprot ID   -
Organism   Streptomyces sp. NA02950     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4208914..4220656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT19_RS18175 (HUT19_18175) - 4209860..4210678 (-) 819 WP_176181497.1 response regulator transcription factor -
  HUT19_RS18180 (HUT19_18180) - 4210946..4211836 (+) 891 WP_176181498.1 alpha/beta hydrolase -
  HUT19_RS18185 (HUT19_18185) - 4211864..4213843 (-) 1980 WP_176181499.1 ABC transporter ATP-binding protein -
  HUT19_RS18190 (HUT19_18190) rcrP 4213914..4215656 (-) 1743 WP_176181500.1 ABC transporter ATP-binding protein Regulator
  HUT19_RS18195 (HUT19_18195) - 4215777..4216052 (+) 276 WP_176181501.1 MoaD/ThiS family protein -
  HUT19_RS18200 (HUT19_18200) - 4216063..4217421 (+) 1359 WP_176181502.1 hypothetical protein -
  HUT19_RS18205 (HUT19_18205) - 4217501..4218187 (+) 687 WP_176181503.1 DUF2993 domain-containing protein -
  HUT19_RS44300 - 4218405..4218485 (+) 81 WP_362448143.1 putative leader peptide -
  HUT19_RS18210 (HUT19_18210) - 4218643..4219482 (+) 840 WP_176181504.1 sulfurtransferase -
  HUT19_RS18215 (HUT19_18215) - 4219517..4219804 (+) 288 WP_176181505.1 DUF1416 domain-containing protein -
  HUT19_RS18220 (HUT19_18220) - 4219966..4220223 (+) 258 WP_176181506.1 DUF3099 domain-containing protein -
  HUT19_RS18225 (HUT19_18225) - 4220279..4220641 (-) 363 WP_176181507.1 DsrE family protein -

Sequence

Protein


Download         Length: 580 a.a.        Molecular weight: 62718.25 Da        Isoelectric Point: 8.1320

>NTDB_id=402025 HUT19_RS18190 WP_176181500.1 4213914..4215656(-) (rcrP) [Streptomyces sp. NA02950]
MLVRLMRGYLRPHTRTIALIVLLQLVQTLATLYLPTLNADIIDGGVVKGDTGYILRIGGFMIAVTVVQIVCSIGAVYFSA
RTAMALGRDVRAAVFDRVQSFSAREMGHFGAPSLITRTTNDVQQVQMLCLMAFTLMVSAPIMCIGGVIMALNQDVPLSAL
LLLIVPVLGVIVTLIVRRMRPLFRGVQERIDTVNRVLREQITGIRVIRAFVRDTHERDRFTGANSDLMDVSLRAGRLMAL
MFPAVMLVVNLSSVAVVWFGGHRIDSGGMQIGALTAFLSYLMQILMAVMMATFMFMMVPRAEVCAERVQEVLDTRTSVAP
PLVPVVPAPSGGGRGLLELRGVEFRYPGAEEPVLREISLIARPGRTTAVIGSTGSGKSTLLGLVPRLFDATDGSVHIDGV
DVRDLDTEVMSRAIGLVPQKPYLFSGTVASNLRYGKPDATDEELWRALETAQARDFVEAMEGGLDAAVAQGGSNVSGGQR
QRLAIARALVRKPSVYLFDDSFSALDYATDARLRAALAGETQDATVVIVAQRVSTIRGADQIVVLDAGRVVGTGTHTELM
AGNQTYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1743 bp        

>NTDB_id=402025 HUT19_RS18190 WP_176181500.1 4213914..4215656(-) (rcrP) [Streptomyces sp. NA02950]
GTGCTGGTCCGACTTATGCGGGGATATCTCCGACCCCACACCCGAACGATCGCGCTGATCGTGCTGTTGCAGCTGGTGCA
GACGCTGGCAACGCTCTATCTGCCCACCCTCAACGCCGACATCATCGACGGCGGGGTGGTGAAGGGGGACACCGGCTACA
TCCTGCGCATCGGCGGTTTCATGATCGCGGTGACGGTGGTGCAGATCGTGTGCTCCATCGGCGCCGTCTACTTCAGCGCC
CGCACCGCCATGGCGCTCGGCCGCGATGTACGGGCCGCGGTCTTCGACCGGGTGCAGTCCTTCTCCGCCCGTGAGATGGG
GCACTTCGGGGCGCCCTCGCTGATCACCCGGACCACCAATGACGTCCAGCAGGTGCAGATGCTGTGCCTGATGGCCTTCA
CCCTGATGGTCTCGGCGCCGATCATGTGCATCGGCGGCGTGATCATGGCGCTCAACCAGGACGTTCCGCTCTCCGCACTG
CTGCTGCTGATCGTCCCGGTGCTCGGGGTCATCGTCACCCTGATCGTCCGCAGGATGCGCCCGCTGTTCCGCGGCGTCCA
GGAGCGCATCGACACCGTCAACCGGGTGCTGCGCGAGCAGATCACCGGGATCCGGGTGATCCGGGCCTTCGTCCGTGACA
CCCATGAGCGCGACCGCTTCACCGGGGCCAACAGCGACCTGATGGACGTCTCGCTGCGCGCCGGGCGGCTGATGGCGCTG
ATGTTCCCCGCGGTGATGCTGGTGGTGAACCTCTCCAGCGTGGCCGTGGTCTGGTTCGGCGGACACCGCATCGACAGCGG
CGGAATGCAGATCGGCGCGCTGACCGCCTTCCTCAGTTACCTGATGCAGATTCTGATGGCGGTCATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCGTCCAGGAGGTGCTGGACACCCGGACCAGCGTGGCTCCC
CCGCTGGTGCCCGTCGTGCCCGCGCCTTCCGGCGGCGGGCGCGGTCTCCTGGAGCTGCGGGGCGTGGAGTTCCGCTACCC
CGGCGCCGAGGAGCCCGTGCTCCGCGAGATCTCGCTGATCGCCCGGCCCGGCCGGACCACCGCCGTGATCGGCTCGACCG
GCAGCGGCAAGTCCACCCTCCTCGGTCTGGTGCCCCGGCTGTTCGACGCGACCGACGGCAGCGTCCACATCGACGGCGTG
GACGTACGCGACCTCGACACCGAGGTGATGTCGCGGGCCATCGGGCTCGTCCCGCAGAAGCCGTACCTCTTCTCCGGCAC
CGTCGCCTCCAATCTGCGCTACGGAAAGCCGGACGCCACCGACGAGGAGCTGTGGCGGGCCCTGGAGACCGCCCAGGCCC
GGGACTTCGTGGAGGCCATGGAGGGCGGGCTCGACGCCGCCGTCGCCCAGGGCGGCTCCAATGTCTCCGGCGGCCAGCGG
CAGCGGCTGGCCATCGCCCGCGCCCTGGTCCGCAAGCCCTCGGTCTACCTCTTCGACGACTCCTTCTCGGCGCTCGACTA
CGCCACCGACGCCCGGCTGCGGGCGGCGCTCGCGGGCGAGACGCAGGACGCGACCGTCGTCATCGTCGCCCAGCGGGTGT
CCACCATCCGCGGCGCCGACCAGATCGTGGTCCTCGACGCCGGGCGCGTCGTGGGCACCGGCACCCACACCGAACTGATG
GCCGGCAACCAGACCTACCGCGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAAGCCGCATGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(354-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.899

97.069

0.378

Multiple sequence alignment