Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GLO19_RS12310 | Genome accession | NZ_CP046247 |
| Coordinates | 2583471..2584037 (+) | Length | 188 a.a. |
| NCBI ID | WP_002364599.1 | Uniprot ID | A0A1B4XKB5 |
| Organism | Enterococcus faecalis strain RF_1_1_25_1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2578471..2589037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GLO19_RS12300 (GLO19_12720) | gyrA | 2580448..2582949 (+) | 2502 | WP_002361457.1 | DNA gyrase subunit A | - |
| GLO19_RS12305 (GLO19_12725) | rpsF | 2583124..2583426 (+) | 303 | WP_002356019.1 | 30S ribosomal protein S6 | - |
| GLO19_RS12310 (GLO19_12730) | ssb | 2583471..2584037 (+) | 567 | WP_002364599.1 | single-stranded DNA-binding protein | Machinery gene |
| GLO19_RS12315 (GLO19_12735) | rpsR | 2584063..2584302 (+) | 240 | WP_002356021.1 | 30S ribosomal protein S18 | - |
| GLO19_RS12320 (GLO19_12740) | - | 2584509..2586485 (+) | 1977 | WP_010710069.1 | DHH family phosphoesterase | - |
| GLO19_RS12325 (GLO19_12745) | rplI | 2586491..2586943 (+) | 453 | WP_002356023.1 | 50S ribosomal protein L9 | - |
| GLO19_RS12330 (GLO19_12750) | dnaB | 2587216..2588583 (+) | 1368 | WP_002381331.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20574.18 Da Isoelectric Point: 4.6010
>NTDB_id=401933 GLO19_RS12310 WP_002364599.1 2583471..2584037(+) (ssb) [Enterococcus faecalis strain RF_1_1_25_1]
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNNAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNNAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
Nucleotide
Download Length: 567 bp
>NTDB_id=401933 GLO19_RS12310 WP_002364599.1 2583471..2584037(+) (ssb) [Enterococcus faecalis strain RF_1_1_25_1]
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGACCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACAATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGACCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACAATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.638 |
100 |
0.606 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.85 |
100 |
0.543 |