Detailed information NTG0401514

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: GKC13_RS04215
• Genome accession: NZ_CP046134
• Coordinates: 809578..810459 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain MAG_rmk202_sterm
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 804578..815459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GKC13_RS04190 (GKC13_04225)	-	806078..806533 (+)	456	WP_024009932.1	DUF4832 domain-containing protein	-
GKC13_RS04195 (GKC13_04230)	galE	806548..807561 (+)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
GKC13_RS04200 (GKC13_04235)	-	807749..807985 (+)	237	WP_002946959.1	DUF1146 family protein	-
GKC13_RS04205 (GKC13_04240)	murA	808055..809326 (+)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
GKC13_RS04210 (GKC13_04245)	-	809328..809516 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
GKC13_RS04215 (GKC13_04250)	endA	809578..810459 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
GKC13_RS04220 (GKC13_04255)	-	810531..811181 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
GKC13_RS04225 (GKC13_04260)	-	811193..811891 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
GKC13_RS04230 (GKC13_04265)	-	811909..812742 (-)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
GKC13_RS04235 (GKC13_04270)	-	812754..813521 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
GKC13_RS04240 (GKC13_04275)	vicR	814048..814755 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=401514 GKC13_RS04215 WP_011681210.1 809578..810459(+) (endA) [Streptococcus thermophilus strain MAG_rmk202_sterm]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=401514 GKC13_RS04215 WP_011681210.1 809578..810459(+) (endA) [Streptococcus thermophilus strain MAG_rmk202_sterm]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594