Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   SSAL_RS01255 Genome accession   NC_017594
Coordinates   228383..230731 (-) Length   782 a.a.
NCBI ID   WP_014632590.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 223383..235731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS01235 (Ssal_00248) lepB 225560..226201 (-) 642 WP_014632588.1 signal peptidase I -
  SSAL_RS01240 (Ssal_00249) rnhC 226220..227110 (-) 891 WP_045001420.1 ribonuclease HIII -
  SSAL_RS01245 (Ssal_00250) - 227427..227741 (+) 315 WP_004183554.1 hypothetical protein -
  SSAL_RS01250 (Ssal_00251) - 227738..228280 (+) 543 WP_002884677.1 CvpA family protein -
  SSAL_RS01255 (Ssal_00253) mutS/mutS2 228383..230731 (-) 2349 WP_014632590.1 endonuclease MutS2 Machinery gene
  SSAL_RS01260 (Ssal_00254) - 230936..231670 (+) 735 WP_002889290.1 ABC transporter ATP-binding protein -
  SSAL_RS10225 (Ssal_00255) - 231680..232318 (+) 639 WP_014632591.1 FtsX-like permease family protein -
  SSAL_RS01265 (Ssal_00256) - 232378..233697 (+) 1320 WP_252866512.1 hypothetical protein -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87618.83 Da        Isoelectric Point: 6.5569

>NTDB_id=40140 SSAL_RS01255 WP_014632590.1 228383..230731(-) (mutS/mutS2) [Streptococcus salivarius 57.I]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYSDLENVELVALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSNQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVATFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQDMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKSSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=40140 SSAL_RS01255 WP_014632590.1 228383..230731(-) (mutS/mutS2) [Streptococcus salivarius 57.I]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTGCGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATCCAAGAAATGG
CAGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTGCGTCGCTTGGAACTG
GATGCTGACCTCAACATCCAGGAGCTCATTGCCATCAAGAAGGTGCTGCAAGCTTCGGCTGACCTTGGTCGCTTCTATTC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTTAAACGTCTTTTCGAAAAGATTGAGGCCTTTCCAAGTCTGCAAGGTAGTC
TTCAAAGCATCAATGACGGTGGTTTCATTGAGCATTTTGCTAGCCCTGAGTTGCAAAATATCCGTCGTCAACTCAAATCT
TGTGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAAAAATCTGGCCACATGTTGGCTGAGAGTCTGATTGCTAG
TCGTAATGGTCGTTCAGTGCTTCCGGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTGGTGCATGACATCTCAAGCT
CTGGAAACACAGTGTATATCGAGCCACGCGCCGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGT
CATGAGATGGCTCGTATCCTGCATGAACTATCTAATCAACTCCGTCCTCAAGCTGCTGCTATCGCCAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCAGGATAAAAAGGCAGTTATTCCAAAGATTAGTGACA
ACCAAACACTCCAACTGCTTAACGTTCGTCACCCTCTTTTGGTCAATCCAGTAGCCAACGATTTACGCTTTGATGAGGAC
CTCACAGCTATTGTCATTACAGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTTGGATTAGCACAACTGAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGTAGTCGTGTAGCCACTTTCCAAGAGATTTTTGCGGACATCGGGG
ATGAACAGTCTATCGAACAGAGTTTGTCAACATTCTCTAGTCACATGACCCACATTGTCGAGATTCTGGACGCTGCCGAC
AGCAACAGTCTTGTCTTAGTCGATGAGCTTGGGGCCGGTACTGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTACGTTTGAGCCAGATTAAAACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAGGGGGTTCCTGGT
CGTTCTAATGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAGATTATTGTCAAGGAAGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAGCACATCAAGG
ACGTTGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAGAAAGAAATTCAAGATATGGTGGATACAGCTTTGGCCGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAGCCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTTCCCCACAAGTGGACCTCT
CTAAGAATAAAGTCCTTCGTAAGGCTAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTCGGAGATGATATCATCGTTACC
GCCTATGGTCAACGTGGTACGCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTTACTCTGGTGCGTGCCCAAGCCGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAAAAGTCATCTGGTGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAGAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.344

100

0.399

Multiple sequence alignment