Detailed information NTG0400541

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GJS33_RS08100
• Genome accession: NZ_CP046041
• Coordinates: 1723962..1724552 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain AZ-45470
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1718962..1729552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJS33_RS08065 (GJS33_08065)	rsmI	1719304..1720170 (-)	867	WP_012516194.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
GJS33_RS08070 (GJS33_08070)	yabA	1720175..1720498 (-)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
GJS33_RS08075 (GJS33_08075)	ricT	1720491..1721291 (-)	801	WP_021321086.1	regulatory iron-sulfur-containing complex subunit RicT	-
GJS33_RS08080 (GJS33_08080)	-	1721288..1722163 (-)	876	WP_021321087.1	DNA polymerase III subunit delta'	-
GJS33_RS08085 (GJS33_08085)	tmk	1722177..1722812 (-)	636	WP_021321088.1	dTMP kinase	-
GJS33_RS08090 (GJS33_08090)	-	1723126..1723410 (-)	285	WP_037579846.1	YlbG family protein	-
GJS33_RS08095 (GJS33_08095)	-	1723411..1723857 (-)	447	WP_111692724.1	YlbF family regulator	-
GJS33_RS08100 (GJS33_08100)	clpP	1723962..1724552 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GJS33_RS08105 (GJS33_08105)	upp	1724784..1725413 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
GJS33_RS08110 (GJS33_08110)	-	1725563..1727194 (-)	1632	WP_042671217.1	polysaccharide biosynthesis protein	-
GJS33_RS08115 (GJS33_08115)	-	1727280..1728725 (+)	1446	WP_154299132.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=400541 GJS33_RS08100 WP_012677455.1 1723962..1724552(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=400541 GJS33_RS08100 WP_012677455.1 1723962..1724552(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGATATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTTTAGCTATTGTTGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCTTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGCACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCCTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTATTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566