Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   FOC72_RS07790 Genome accession   NZ_CP054570
Coordinates   1625464..1626246 (-) Length   260 a.a.
NCBI ID   WP_002896423.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1620464..1631246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS07770 (FOC72_07770) - 1621934..1622743 (-) 810 WP_002896419.1 ABC transporter permease -
  FOC72_RS07775 (FOC72_07775) - 1622736..1623731 (-) 996 WP_002896420.1 ABC transporter permease -
  FOC72_RS07780 (FOC72_07780) - 1623724..1624707 (-) 984 WP_002896421.1 M14 family metallopeptidase -
  FOC72_RS07785 (FOC72_07785) - 1624697..1625467 (-) 771 WP_002896422.1 ABC transporter ATP-binding protein -
  FOC72_RS07790 (FOC72_07790) amiE 1625464..1626246 (-) 783 WP_002896423.1 ABC transporter ATP-binding protein Regulator
  FOC72_RS07795 (FOC72_07795) - 1626250..1627845 (-) 1596 WP_002896424.1 ABC transporter substrate-binding protein -
  FOC72_RS07800 (FOC72_07800) - 1627962..1629065 (-) 1104 WP_002896425.1 NADH-dependent flavin oxidoreductase -
  FOC72_RS07805 (FOC72_07805) - 1629121..1629693 (-) 573 WP_002896426.1 histidine phosphatase family protein -
  FOC72_RS07810 (FOC72_07810) cobS 1629690..1630418 (-) 729 WP_002896428.1 adenosylcobinamide-GDP ribazoletransferase -
  FOC72_RS07815 (FOC72_07815) cobU 1630415..1630999 (-) 585 WP_002896430.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 28649.71 Da        Isoelectric Point: 9.7517

>NTDB_id=400183 FOC72_RS07790 WP_002896423.1 1625464..1626246(-) (amiE) [Streptococcus sanguinis strain FDAARGOS_770]
MLEMKDLLVQSADKVILDRVSLSLAEGESLSIVGESGSGKSTLLKMLLGLPLRGLTVAGGSMVFEGQKIHPQNHRIYLPF
VGREVAWISQHASLSFNNRRKIKKHYQDLVKNQGQKAANLRPLEECLEMVGLLPEKVVNKYPFELSGGMMQLVGVALALA
SRPKLLLADEPTSALDVLSKMKLLDLLSKLHQEEKMAILFVTHDISVAEHLAQKVVVMKEGQIVESGPAHQVLRHPEQAY
TQKLLKAVPKLAAFREGGQL

Nucleotide


Download         Length: 783 bp        

>NTDB_id=400183 FOC72_RS07790 WP_002896423.1 1625464..1626246(-) (amiE) [Streptococcus sanguinis strain FDAARGOS_770]
ATGCTGGAAATGAAAGATCTGCTGGTGCAGTCAGCAGATAAAGTCATTCTCGATCGGGTCTCCCTCTCTCTTGCTGAGGG
GGAGTCCCTTTCGATTGTGGGCGAGAGTGGCAGTGGCAAGTCCACCCTGCTCAAGATGCTGCTTGGTCTCCCACTCAGGG
GGCTGACAGTAGCAGGGGGCAGTATGGTCTTTGAAGGGCAGAAGATTCATCCCCAGAACCATCGCATTTATCTGCCTTTT
GTAGGCCGAGAAGTGGCCTGGATTAGTCAGCATGCCAGTCTCAGCTTCAATAACCGCCGTAAGATCAAAAAGCATTATCA
GGACTTGGTGAAAAATCAGGGCCAGAAAGCAGCAAATCTCCGTCCCTTGGAAGAATGTCTAGAAATGGTGGGACTGCTGC
CTGAAAAAGTCGTCAATAAGTATCCTTTCGAACTTAGTGGCGGTATGATGCAGCTAGTCGGTGTGGCGCTAGCTCTAGCT
AGCAGACCCAAACTATTGCTGGCTGATGAGCCGACTAGCGCTCTGGATGTCCTGTCGAAAATGAAGCTGCTTGATCTCTT
GAGCAAGCTTCATCAGGAGGAAAAAATGGCCATTCTCTTTGTTACACATGATATCAGTGTGGCTGAGCATCTAGCGCAAA
AAGTAGTTGTCATGAAAGAAGGGCAGATTGTCGAAAGTGGTCCAGCCCATCAAGTTCTTCGCCATCCTGAGCAGGCCTAC
ACCCAGAAATTGCTGAAGGCCGTGCCTAAGCTAGCAGCATTTAGAGAAGGGGGGCAGCTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-173)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

37.079

100

0.381
  amiE Streptococcus thermophilus LMD-9

37.079

100

0.381
  amiE Streptococcus salivarius strain HSISS4

37.079

100

0.381