Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC72_RS04940 Genome accession   NZ_CP054570
Coordinates   995683..997461 (-) Length   592 a.a.
NCBI ID   WP_002895566.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 990683..1002461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS04915 (FOC72_04915) - 991484..992047 (-) 564 WP_002895559.1 redoxin family protein -
  FOC72_RS04920 (FOC72_04920) - 992118..992438 (-) 321 WP_002895560.1 hypothetical protein -
  FOC72_RS04925 (FOC72_04925) ccdA2 992465..993175 (-) 711 WP_002895561.1 thiol-disulfide oxidoreductase-associated membrane protein CcdA2 -
  FOC72_RS04930 (FOC72_04930) brnQ 993333..994661 (-) 1329 WP_002895563.1 branched-chain amino acid transport system II carrier protein -
  FOC72_RS04935 (FOC72_04935) - 995074..995628 (-) 555 WP_002895565.1 GNAT family N-acetyltransferase -
  FOC72_RS04940 (FOC72_04940) rcrQ 995683..997461 (-) 1779 WP_002895566.1 ABC transporter ATP-binding protein Regulator
  FOC72_RS04945 (FOC72_04945) rcrP 997475..999211 (-) 1737 WP_002895567.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 66676.25 Da        Isoelectric Point: 6.4133

>NTDB_id=400155 FOC72_RS04940 WP_002895566.1 995683..997461(-) (rcrQ) [Streptococcus sanguinis strain FDAARGOS_770]
MKNTSSFARLWSYLKVYKFAVAFAIFLKILSVVMSVVEPFVLGLAITELTNNLLDMAKGVAGAQINVFYVGWVMVLYFLR
AIFYEIGSYYSNYFMTNAVQATIRDLRDELSHKINRIPVSYFDKHQFGDLLGRFTSDVEAVSNALQQSFLQVINAVFTLI
LVIVMVLVLNLQLGIIVVISIPITYLSARFIVKKSQPYFKQQADALGAMNGFVQENLTGFNILKLYVREESSQEDFRQIT
QNLQKVGFKASFISGLMMPVLNVISDLTYLLLALLGGLQVIAGRLTVGNMQAFVQYVWQINQPIQNLTQLAGQLQSAKSS
LDRIFQVLDEADEVNDRTEKLEQDLTGQVSFKDVDFQYVADKPLIRNFNLEVKPGEMVAIVGPTGAGKTTLINLLMRFYD
VTKGAITVDGHDIRHLSRQDYRKQFGMVLQDAWLYEGTIKENLRFGNLQATDEEIVEAAKAANVDHFIRTLPGGYNMEMN
QESSNISLGQKQLLTIARALLANPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHESLLADKGFYYDLYQSQFSKKAEEV

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=400155 FOC72_RS04940 WP_002895566.1 995683..997461(-) (rcrQ) [Streptococcus sanguinis strain FDAARGOS_770]
ATGAAAAACACGTCAAGTTTTGCTCGTCTGTGGAGCTACCTAAAAGTTTATAAATTTGCAGTCGCCTTTGCGATTTTCCT
CAAAATCCTCAGTGTCGTTATGAGTGTCGTCGAGCCCTTTGTCTTAGGTCTAGCCATTACTGAACTGACAAATAATCTGC
TAGATATGGCTAAAGGGGTGGCTGGCGCCCAGATTAATGTGTTCTATGTTGGCTGGGTCATGGTCTTGTATTTTCTGCGG
GCGATTTTTTATGAAATCGGTTCTTACTATTCTAATTACTTTATGACCAATGCAGTGCAGGCTACCATTCGGGACTTGCG
CGATGAACTTAGTCATAAGATTAATCGTATTCCCGTTTCTTACTTTGATAAGCATCAGTTTGGTGACTTGCTGGGGCGTT
TTACCAGCGATGTCGAAGCTGTTTCCAATGCCTTGCAGCAGTCCTTTCTGCAAGTTATCAACGCAGTCTTTACTCTAATC
TTGGTCATCGTAATGGTATTAGTACTCAATCTGCAGTTGGGGATAATTGTGGTAATTTCTATTCCGATTACCTACCTCAG
TGCTCGCTTTATCGTAAAGAAATCCCAGCCGTACTTTAAACAGCAGGCAGATGCACTAGGAGCTATGAATGGCTTTGTTC
AAGAAAATCTGACAGGCTTTAATATTTTGAAGCTCTATGTCAGAGAAGAAAGCTCCCAGGAGGATTTTCGTCAAATTACG
CAAAATCTGCAGAAAGTAGGTTTTAAAGCCAGCTTTATTTCTGGTTTGATGATGCCTGTTTTGAATGTTATTTCAGATCT
GACCTACCTCTTGTTGGCCCTGCTGGGCGGCCTTCAGGTTATTGCAGGGCGATTGACAGTCGGAAATATGCAAGCCTTTG
TTCAGTATGTCTGGCAGATTAATCAGCCCATTCAAAACCTGACTCAGCTGGCTGGTCAGCTGCAGAGTGCCAAGTCTTCT
TTAGACCGGATTTTCCAAGTGCTGGACGAAGCAGATGAAGTCAATGATAGGACAGAAAAGCTGGAGCAAGATCTGACAGG
TCAGGTTAGCTTCAAGGATGTGGACTTCCAGTATGTGGCAGACAAGCCGCTCATTCGGAATTTCAATCTGGAAGTCAAAC
CTGGAGAAATGGTGGCTATTGTCGGTCCGACTGGTGCTGGTAAGACTACGTTGATTAACTTGCTCATGCGTTTCTACGAT
GTAACCAAAGGCGCGATTACAGTTGATGGGCATGACATACGCCATCTGTCCCGTCAGGACTACCGTAAACAGTTCGGTAT
GGTGTTGCAGGATGCCTGGCTTTATGAGGGGACTATAAAGGAAAATCTTCGTTTTGGCAATCTGCAAGCCACTGATGAAG
AAATTGTAGAGGCGGCCAAGGCGGCTAATGTGGACCACTTTATACGGACCTTACCAGGCGGCTACAATATGGAAATGAAT
CAAGAATCCAGCAATATCTCGCTGGGGCAGAAGCAGTTGCTTACGATTGCGAGGGCTCTTTTGGCCAATCCTAAGATTCT
GATTTTGGATGAAGCGACCTCATCTGTCGATACACGGCTGGAGCTCTTGATTCAGAAAGCTATGAAGACTCTCATGCAGG
GGCGGACCAGTTTTGTCATTGCTCACCGACTGTCGACCATTCAAGAAGCGGATAAGATTTTGGTGCTCAAGGATGGTCAG
ATTATCGAGCAAGGCAATCACGAGAGTCTCTTGGCTGATAAAGGATTTTATTATGACCTTTATCAGAGTCAATTTTCTAA
AAAAGCAGAAGAAGTTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(22-303)

ABC transporter (ABC_tran)

(366-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.664

100

0.427

Multiple sequence alignment