Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC72_RS03765 Genome accession   NZ_CP054570
Coordinates   756926..758662 (+) Length   578 a.a.
NCBI ID   WP_002895241.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 751926..763662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS03745 (FOC72_03745) - 752020..752385 (+) 366 WP_002895233.1 VOC family protein -
  FOC72_RS03750 (FOC72_03750) asnS 752407..753753 (+) 1347 WP_002895235.1 asparagine--tRNA ligase -
  FOC72_RS03755 (FOC72_03755) - 753910..755097 (+) 1188 WP_002895236.1 MFS transporter -
  FOC72_RS03760 (FOC72_03760) - 755194..756936 (+) 1743 WP_002895239.1 ABC transporter ATP-binding protein -
  FOC72_RS03765 (FOC72_03765) rcrQ 756926..758662 (+) 1737 WP_002895241.1 ABC transporter ATP-binding protein Regulator
  FOC72_RS03770 (FOC72_03770) - 758738..760264 (-) 1527 WP_002895242.1 ATP-binding cassette domain-containing protein -
  FOC72_RS03775 (FOC72_03775) - 760882..761073 (+) 192 WP_002895243.1 hypothetical protein -
  FOC72_RS03780 (FOC72_03780) - 761187..762968 (+) 1782 WP_002895244.1 serine hydrolase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64525.43 Da        Isoelectric Point: 6.5082

>NTDB_id=400147 FOC72_RS03765 WP_002895241.1 756926..758662(+) (rcrQ) [Streptococcus sanguinis strain FDAARGOS_770]
MKHKTSPSSLRRLTRDLLQARWLFFLASLGTVAQVALTVLLPVLIGNAVDSVLLPQADQHLVPILGQMLLVILANTLIQW
LNPLLYNQLVYRYSQQLRQGVIKKVHYLPLAYLDRQGTGDLVSRVTTDLEQLSNGLLMVFNQFFVGLLTILVTIISMARL
DFFLLLLVLLLTPLSLFLARFIARKSFSFFQRQTQARGAQTQLIEESLTQESLIQAFNAQEQFDKAFTRSNQTYADYSQA
AIFYSSTVNPSTRFINALIYALIVGFGAVRIIQGTGFTVGQLVTFLNYVNQYTKPFNDISSVMSELQSALACAERIYSVL
DQEEIAESGQEILQSEDVRGQISFEHVAFGYEPGKELIQDLNIRIPAASKVAIVGPTGAGKSTLINLLMRFYNVDSGLIS
LDGTPISHYTRASYRQQFGMVLQETWLKTATIHDNIAFGRPDASREEVIAAAKAANAHFFIQQLPQGYDTYLADAGDSLS
QGQRQLLTIARVFLSVPKILILDEATSSIDTRTEVLIQEAFSKLMVGRTSFIIAHRLSTIQNADIILVMVDGDIVEHGNH
QELMAARGVYYQMQMAQE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=400147 FOC72_RS03765 WP_002895241.1 756926..758662(+) (rcrQ) [Streptococcus sanguinis strain FDAARGOS_770]
ATGAAGCATAAGACATCACCTAGCAGCTTGAGGCGTTTGACTCGAGATTTGCTGCAGGCGCGCTGGCTCTTTTTCCTAGC
TAGTCTGGGAACGGTGGCTCAAGTGGCTCTGACTGTTCTTCTACCAGTTTTAATCGGGAATGCGGTCGATAGCGTTCTTC
TGCCTCAAGCGGACCAGCATTTGGTGCCGATTTTGGGCCAGATGTTGTTGGTCATCTTAGCCAATACGCTGATTCAGTGG
CTCAATCCCTTGCTCTATAATCAGCTGGTTTATCGCTATAGCCAGCAACTCCGACAGGGTGTTATCAAGAAAGTTCATTA
TCTGCCTTTGGCTTATCTGGATCGACAGGGAACCGGAGACTTGGTTAGTCGGGTGACGACGGACTTGGAGCAGCTTAGCA
ATGGCTTGCTTATGGTTTTTAATCAGTTTTTTGTGGGTTTGTTGACCATCTTAGTCACCATCATTAGCATGGCCAGATTG
GACTTTTTCCTCTTGCTTTTGGTTCTGCTTTTGACGCCCCTTTCTCTTTTTTTAGCGCGCTTTATTGCCAGAAAGAGTTT
TAGCTTTTTCCAACGGCAGACGCAGGCGAGAGGGGCACAGACCCAGCTGATTGAGGAAAGTCTGACCCAGGAAAGTCTGA
TACAGGCTTTTAATGCTCAGGAGCAGTTTGACAAAGCTTTTACTCGCAGCAATCAAACTTATGCAGATTATTCTCAGGCG
GCTATTTTCTATTCTTCGACGGTCAATCCTTCGACTCGTTTTATCAATGCCCTGATTTATGCTTTGATTGTAGGCTTTGG
GGCTGTCCGAATCATTCAGGGAACAGGTTTTACGGTTGGGCAGCTGGTAACTTTTCTCAACTACGTCAACCAGTACACCA
AGCCTTTCAACGATATATCGTCAGTCATGTCAGAATTGCAGAGCGCTTTAGCTTGTGCGGAGCGAATTTACAGCGTTTTG
GACCAAGAAGAAATAGCAGAGTCTGGTCAGGAAATCCTCCAGTCGGAAGATGTCAGAGGACAGATTAGCTTTGAGCATGT
GGCTTTTGGTTATGAGCCTGGCAAAGAGCTGATTCAGGATTTGAATATAAGGATTCCAGCAGCTAGCAAGGTCGCAATTG
TCGGGCCAACTGGTGCTGGCAAGTCTACCTTGATCAATCTCCTCATGCGATTTTACAATGTTGATAGTGGTCTTATTTCG
CTAGACGGTACTCCCATCTCGCATTACACCAGAGCCTCTTATCGTCAGCAGTTTGGCATGGTACTGCAAGAGACTTGGCT
AAAGACGGCGACTATACACGACAACATAGCTTTTGGCCGGCCAGATGCTAGCCGAGAAGAAGTCATTGCAGCTGCCAAGG
CGGCCAATGCACATTTCTTTATCCAGCAGCTACCTCAGGGGTATGACACCTATCTGGCGGATGCTGGGGACTCACTGTCT
CAAGGTCAGCGGCAGCTATTAACCATCGCGCGCGTCTTCCTTTCGGTTCCTAAAATCCTAATCTTGGATGAGGCGACTTC
CTCTATCGATACCCGGACAGAAGTCTTGATTCAGGAGGCTTTCAGCAAGCTCATGGTGGGACGGACTAGCTTTATCATCG
CCCACCGCCTGTCTACTATTCAAAATGCTGACATCATCCTCGTCATGGTAGATGGTGATATCGTCGAACATGGGAATCAC
CAGGAGCTCATGGCAGCCAGAGGTGTTTATTACCAAATGCAGATGGCGCAGGAGTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.123

98.616

0.386

Multiple sequence alignment