Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | GIY05_RS10205 | Genome accession | NZ_CP045916 |
| Coordinates | 2167604..2168239 (+) | Length | 211 a.a. |
| NCBI ID | WP_003091163.1 | Uniprot ID | A0A0H2ZBU7 |
| Organism | Pseudomonas aeruginosa strain CF39S | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2162604..2173239
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GIY05_RS10190 | - | 2163310..2164554 (+) | 1245 | WP_003105198.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| GIY05_RS10195 | - | 2164642..2165175 (-) | 534 | WP_003091165.1 | DUF2062 domain-containing protein | - |
| GIY05_RS10200 | comA | 2165306..2167531 (+) | 2226 | WP_003158743.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| GIY05_RS10205 | exbB | 2167604..2168239 (+) | 636 | WP_003091163.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| GIY05_RS10210 | - | 2168236..2168676 (+) | 441 | WP_003091161.1 | biopolymer transporter ExbD | - |
| GIY05_RS10215 | lpxK | 2168676..2169674 (+) | 999 | WP_003091159.1 | tetraacyldisaccharide 4'-kinase | - |
| GIY05_RS10220 | - | 2169712..2169897 (+) | 186 | WP_003091157.1 | Trm112 family protein | - |
| GIY05_RS10225 | kdsB | 2169897..2170661 (+) | 765 | WP_003106922.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| GIY05_RS10230 | - | 2170661..2171125 (+) | 465 | WP_003106924.1 | low molecular weight protein-tyrosine-phosphatase | - |
| GIY05_RS10235 | murB | 2171122..2172141 (+) | 1020 | WP_003106928.1 | UDP-N-acetylmuramate dehydrogenase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22890.06 Da Isoelectric Point: 6.7278
>NTDB_id=399047 GIY05_RS10205 WP_003091163.1 2167604..2168239(+) (exbB) [Pseudomonas aeruginosa strain CF39S]
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
Nucleotide
Download Length: 636 bp
>NTDB_id=399047 GIY05_RS10205 WP_003091163.1 2167604..2168239(+) (exbB) [Pseudomonas aeruginosa strain CF39S]
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGTCTGGCCAAC
TCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGTACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCCGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGTCTGGCCAAC
TCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGTACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCCGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
81.043 |
100 |
0.81 |