Detailed information NTG0039852

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: INV104_RS10085
• Genome accession: NC_017591
• Coordinates: 1896181..1896660 (-)
• Length: 159 a.a.
• NCBI ID: WP_000588900.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae INV104
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1891181..1901660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INV104_RS10080 (INV104_17270)	-	1895191..1896144 (+)	954	WP_001155321.1	IS30-like element ISSpn8 family transposase	-
INV104_RS10085	comX/comX2	1896181..1896660 (-)	480	WP_000588900.1	sigma-70 family RNA polymerase sigma factor	Regulator
INV104_RS10090 (INV104_17280)	nusG	1896782..1897318 (-)	537	WP_000376736.1	transcription termination/antitermination protein NusG	-
INV104_RS10095 (INV104_17290)	secE	1897374..1897550 (-)	177	WP_001210991.1	preprotein translocase subunit SecE	-
INV104_RS10100	rpmG	1897560..1897712 (-)	153	WP_001809375.1	50S ribosomal protein L33	-
INV104_RS10105 (INV104_17300)	pbp2a	1897765..1899960 (-)	2196	WP_000762608.1	penicillin-binding protein PBP2A	-
INV104_RS10110 (INV104_17310)	-	1900047..1900922 (+)	876	WP_001844084.1	RluA family pseudouridine synthase	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19899.55 Da
• Isoelectric Point: 7.3186

>NTDB_id=39852 INV104_RS10085 WP_000588900.1 1896181..1896660(-) (comX/comX2) [Streptococcus pneumoniae INV104]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRR
YDKEPYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTY

Nucleotide

• Length: 480 bp

>NTDB_id=39852 INV104_RS10085 WP_000588900.1 1896181..1896660(-) (comX/comX2) [Streptococcus pneumoniae INV104]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTGTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
GTCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGTAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAGA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGATCAGTCATCGTATAAGTGAGGGGGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCTACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	91.139	99.371	0.906
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	89.241	99.371	0.887
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comX/sigX	Streptococcus mutans UA159	46	94.34	0.434
comX/sigX	Streptococcus suis isolate S10	45.695	94.969	0.434
comX/sigX	Streptococcus suis D9	45.695	94.969	0.434
comX/sigX	Streptococcus suis P1/7	45.695	94.969	0.434
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	94.34	0.377