Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HRE60_RS06690 Genome accession   NZ_CP054153
Coordinates   1516447..1518315 (-) Length   622 a.a.
NCBI ID   WP_181670535.1    Uniprot ID   -
Organism   Streptococcus salivarius strain DB-B5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1511447..1523315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS06680 (HRE60_06680) - 1513308..1514396 (-) 1089 WP_181670533.1 hypothetical protein -
  HRE60_RS06685 (HRE60_06685) - 1514829..1516352 (+) 1524 WP_181670534.1 ATP-binding cassette domain-containing protein -
  HRE60_RS06690 (HRE60_06690) rcrQ 1516447..1518315 (-) 1869 WP_181670535.1 ABC transporter ATP-binding protein Regulator
  HRE60_RS06695 (HRE60_06695) - 1518305..1520050 (-) 1746 WP_181670536.1 ABC transporter ATP-binding protein -
  HRE60_RS06700 (HRE60_06700) gshAB 1520687..1522957 (+) 2271 WP_181670537.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68780.18 Da        Isoelectric Point: 4.9887

>NTDB_id=397533 HRE60_RS06690 WP_181670535.1 1516447..1518315(-) (rcrQ) [Streptococcus salivarius strain DB-B5]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFVLIVVASLATVNLTASIQSLVDVYVQPMLKSGSHDFGPLLRFLTSVAVF
CLIGVIANYVSSLLMATISQDSLRTLRNQLFARMQKLPVRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTAITLI
GVTVTMLTVSPLLFIVVLVMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYANVLMPILGNLGNVSFVLTALVGGLFALNGVGGLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEPEEVDQGKVTLVNYELVDGQMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
DVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIAENIAYG
RADATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=397533 HRE60_RS06690 WP_181670535.1 1516447..1518315(-) (rcrQ) [Streptococcus salivarius strain DB-B5]
ATGCAGAATAAGAAAAAAGCTAATTGGGGCTCTCTAGCACGTCTTCTACGCTTTTTGTGGCAAGACTACAAACTTTCACT
TTCTATCGCCTTTGTCCTTATTGTGGTTGCTTCTTTGGCAACGGTCAATTTGACAGCGTCTATTCAGTCCTTGGTTGACG
TTTACGTTCAGCCCATGCTCAAATCTGGCAGCCATGACTTTGGACCACTGTTACGGTTCTTGACCTCAGTCGCTGTCTTC
TGTCTTATCGGTGTGATTGCCAACTATGTGTCATCACTCCTCATGGCGACGATTTCGCAAGATTCTCTACGTACTCTTCG
TAATCAGCTCTTTGCTCGCATGCAAAAGCTTCCTGTTCGCTACTTTGACACTCACCAACACGGTGATATCATGTCTATTT
ACACCAACGACATCGATGCCCTCCGTCAGGCTGTTGAGCAATCTATTCCACAGTTGCTACAAACGGCCATTACCTTGATT
GGGGTAACTGTAACCATGCTTACGGTTAGTCCTCTTCTCTTTATCGTGGTCCTAGTCATGGTAGGTATCATGTTTATGGT
CATCAAAAATGTATCAGCTAAATCAGGCCGTTACTTTGGTGAACAACAAAAGAATCTGGGGATTGAAAATGGCTTCATTG
AAGAAATGATGTCAGGTCAAAAGGTGGTTAAGGCCTTTGTCCACGAAGAAGAAAGCATGGCTGATTTTGACAAGATTAAC
GAGCAACTCTTTGAATCTTCTTACTTGGCTAACCGCTATGCCAATGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACCGCCTTGGTTGGTGGACTCTTTGCCCTTAATGGTGTTGGTGGTTTGACTATCGGTGGTCTCATGG
CCTTCCTACAATTGAACCGTTCCTTCAACGGTCCTATTACTCAGGTCTCTCAACAACTGAACTTTGTTCTTATGGCACTT
GCTGGTGCTGACCGTATCTTTGACCTTCTGGACGAACCAGAAGAAGTTGACCAAGGTAAGGTCACTTTGGTCAACTACGA
ATTGGTTGATGGTCAGATGGTTGTGACAGACAAGAAAACCAATCTCTGGGCTTGGAAACACCCACGTCCAAATGGCGACT
ACGAATTGGTCGAGTTGGTCGGAAATGTGGTCTTCCAAGACGTTGATTTCTCTTACGATGGTAAGAAACAAATCCTTCAT
GACGTTAATCTATACGCAGACAAGGGGCAAAAGGTAGCCTTTGTGGGTGCGACAGGTGCTGGTAAGACGACGATTACCAA
CTTGATTAACCGTTTCTACGATATCCAATCTGGTGTGATTACTTATGATGGTATTGATGTCAAGCTGATTGAGAAAGATT
CTCTTCGTCGCTCGCTTGGTATCGTGCTTCAAGATACCCATCTCTTCACAGGGACTATCGCTGAAAATATTGCCTATGGT
CGTGCCGATGCGACACGCGAGGAAATTCTTGAAGCTGCCCGTATTGCTAACGTGGATTCCTTTGTGCAACACTTGGATAA
TGGGTATGACACTGTTCTTACAGATGACGGTGCAGGCTTGTCTAATGGGCAACGTCAGCTTATCGCCATTGCGCGTGCTG
CCCTTGCCAATGCACCGGTTCTTATCCTTGACGAGGCGACATCCTCTATTGACTCTCGTACCGAAAAAATGGTACAAGAA
GGGATGGACCGACTTATGGAAGGACGTACGGTTTTCGTTATTGCCCACCGTCTTTCAACCATTGTCAACTCTGACGTTAT
CATGGTTATGGACCACGGACGAATCATTGAACGTGGTGACCACGACAGCCTTATGGAACAAGGTGGTACTTACTACCGAC
TTTATACCGGTGGTCTGGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(399-548)

ABC transporter transmembrane region (ABC_membrane)

(29-305)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.073

98.875

0.367

Multiple sequence alignment