Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC63_RS10795 Genome accession   NZ_CP054015
Coordinates   2154686..2156455 (-) Length   589 a.a.
NCBI ID   WP_009854404.1    Uniprot ID   A0A1H7TY17
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2149686..2161455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS10765 (FOC63_10765) gdhA 2149986..2151335 (-) 1350 WP_009854398.1 NADP-specific glutamate dehydrogenase -
  FOC63_RS10770 (FOC63_10770) - 2151582..2152079 (+) 498 WP_009854399.1 DUF308 domain-containing protein -
  FOC63_RS10775 (FOC63_10775) queF 2152136..2152627 (-) 492 WP_009854400.1 preQ(1) synthase -
  FOC63_RS10780 (FOC63_10780) queE 2152640..2153353 (-) 714 WP_009854401.1 7-carboxy-7-deazaguanine synthase QueE -
  FOC63_RS10785 (FOC63_10785) queD 2153346..2153792 (-) 447 WP_009854402.1 6-carboxytetrahydropterin synthase QueD -
  FOC63_RS10790 (FOC63_10790) queC 2153798..2154445 (-) 648 WP_043878574.1 7-cyano-7-deazaguanine synthase QueC -
  FOC63_RS10795 (FOC63_10795) rcrQ 2154686..2156455 (-) 1770 WP_009854404.1 ABC transporter ATP-binding protein Regulator
  FOC63_RS10800 (FOC63_10800) - 2156458..2158197 (-) 1740 WP_043878575.1 ABC transporter ATP-binding protein -
  FOC63_RS10805 (FOC63_10805) - 2158275..2160146 (-) 1872 WP_009854406.1 ABC-F family ATP-binding cassette domain-containing protein -
  FOC63_RS10810 (FOC63_10810) - 2160143..2161348 (-) 1206 WP_009854407.1 CCA tRNA nucleotidyltransferase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66068.30 Da        Isoelectric Point: 5.1328

>NTDB_id=397175 FOC63_RS10795 WP_009854404.1 2154686..2156455(-) (rcrQ) [Streptococcus gallolyticus strain FDAARGOS_755]
MSKRNVFLRLWDYLQQYKGALFLAIFLKVFSSVMSVLEPFILGLAITELTANLLDMAHGVAGAHINISYIAMILALYFLR
GLGYELGSYWSNYFMTDAVQKSIHDLRRDLSEKINKIPVSYFDSQQFGNVLGRFTSDVETVSNALQQSFLQIINAFLTIF
LVICMVLYLNWRLALVVILIIPITYISAQFILKKSQPYFKKQADALGDMNGFVQENLTGFNVIKLYGREEISSEEFREIT
QNLQEVGFKASFISGIMMPVLSAISDMAYLIVAVLGALQVLSGNLTVGNMQAFVQYVWQVSQPVQTITQLASILQSAKSS
LDRIFEVLDEPEEVADVTEHLTHDLTGQVSFENVSFQYVADKPLIQNFNLDVKPGEMVAIVGPTGAGKTTLINLLMRFYD
VTSGSIKIDGHDIRNLSRQEYRKQFGMVLQDAWLYEASIKENLRFGNLDATDEEVVEAAKAANVDHFIRTLPGGYNMEMN
QESSNVSLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMAKLMEGRTSFVIAHRLSTIQEADKILVLNNGQ
IIEQGNHESLLAAKGFYYDLYNSQFAKSK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=397175 FOC63_RS10795 WP_009854404.1 2154686..2156455(-) (rcrQ) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGTCAAAACGCAACGTTTTTCTACGTTTATGGGATTATCTCCAACAATATAAAGGTGCGCTTTTTCTTGCCATTTTCTT
GAAAGTTTTCAGTAGTGTCATGAGTGTATTGGAACCTTTTATTTTAGGGCTTGCCATTACAGAATTGACGGCAAACCTTC
TTGACATGGCGCACGGTGTAGCAGGTGCTCATATCAATATTTCTTATATTGCAATGATTTTAGCCCTTTATTTCTTGCGA
GGTTTGGGTTATGAGCTAGGAAGCTATTGGTCAAACTATTTCATGACTGACGCTGTGCAAAAAAGTATTCATGATTTGCG
CCGAGATTTAAGTGAAAAAATCAATAAAATTCCAGTTTCTTATTTTGACAGTCAACAATTCGGAAATGTCTTGGGACGTT
TTACGTCAGATGTTGAAACAGTCTCAAACGCTTTACAACAAAGCTTTCTTCAAATTATCAATGCTTTCTTAACCATTTTC
TTGGTTATTTGCATGGTGCTTTACCTCAATTGGCGTTTGGCTTTGGTGGTTATTTTAATCATTCCAATCACTTATATCAG
TGCTCAGTTTATTTTGAAAAAATCTCAACCCTATTTCAAAAAACAAGCTGACGCTCTCGGTGATATGAACGGTTTTGTTC
AGGAAAATCTAACTGGCTTTAACGTTATCAAACTTTATGGTCGTGAAGAAATTTCAAGTGAAGAATTTCGTGAAATCACT
CAAAATTTGCAAGAAGTTGGTTTCAAGGCAAGCTTTATTTCAGGAATTATGATGCCAGTTCTTAGTGCAATTTCTGATAT
GGCTTACCTGATTGTGGCAGTTTTGGGAGCTTTGCAAGTTCTTTCTGGGAACTTGACGGTTGGTAATATGCAAGCTTTCG
TTCAATACGTTTGGCAAGTCAGTCAACCCGTTCAAACCATTACACAGTTGGCAAGTATTCTTCAAAGTGCCAAGTCATCA
CTTGACCGTATCTTTGAAGTTCTAGATGAGCCAGAAGAAGTTGCTGATGTAACAGAGCATTTGACACATGATTTAACAGG
TCAAGTTAGCTTTGAAAATGTTTCCTTCCAATACGTGGCAGACAAACCATTGATTCAAAACTTCAATCTTGATGTCAAAC
CAGGTGAAATGGTGGCGATTGTTGGTCCAACAGGGGCTGGTAAGACAACGCTGATTAATCTTTTAATGCGATTCTACGAC
GTTACCTCTGGTTCGATTAAAATTGATGGGCATGATATTCGCAACTTGTCACGTCAAGAATATCGCAAACAATTTGGAAT
GGTCTTGCAAGATGCGTGGCTCTACGAGGCAAGTATCAAGGAAAATCTCCGTTTTGGGAACTTGGATGCGACAGATGAAG
AGGTTGTTGAGGCTGCTAAAGCTGCCAATGTTGACCACTTTATTCGTACGCTACCTGGTGGTTACAATATGGAAATGAAC
CAAGAATCAAGCAACGTATCACTTGGTCAAAAACAATTGTTAACCATTGCGCGTGCCTTGCTTGCTGACCCTAAAATCCT
GATTTTGGACGAAGCAACGTCATCTGTTGACACACGTTTGGAATTATTGATTCAAAAGGCTATGGCTAAATTAATGGAAG
GGCGTACAAGCTTTGTCATTGCTCACCGCCTATCAACCATTCAAGAGGCTGATAAGATTTTGGTGCTTAACAATGGTCAA
ATCATTGAACAGGGCAATCATGAAAGTTTATTAGCTGCGAAAGGTTTCTATTATGACCTTTACAATAGCCAGTTTGCCAA
AAGCAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-304)

ABC transporter (ABC_tran)

(366-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H7TY17

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.482

100

0.445

Multiple sequence alignment