Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FOC63_RS10745 Genome accession   NZ_CP054015
Coordinates   2146370..2148184 (-) Length   604 a.a.
NCBI ID   WP_009854393.1    Uniprot ID   A0A1I7HK26
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2141370..2153184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS10720 (FOC63_10720) - 2141385..2142305 (-) 921 WP_009854388.1 glycine betaine ABC transporter substrate-binding protein -
  FOC63_RS10725 (FOC63_10725) - 2142295..2142930 (-) 636 WP_009854389.1 ABC transporter permease -
  FOC63_RS10730 (FOC63_10730) - 2142920..2143372 (-) 453 WP_009854390.1 MarR family winged helix-turn-helix transcriptional regulator -
  FOC63_RS10735 (FOC63_10735) - 2143362..2144339 (-) 978 WP_009854391.1 zinc-binding dehydrogenase -
  FOC63_RS10740 (FOC63_10740) rcrQ 2144608..2146380 (-) 1773 WP_009854392.1 ABC transporter ATP-binding protein Regulator
  FOC63_RS10745 (FOC63_10745) rcrP 2146370..2148184 (-) 1815 WP_009854393.1 ABC transporter ATP-binding protein Regulator
  FOC63_RS10750 (FOC63_10750) rcrR 2148188..2148628 (-) 441 WP_012962070.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FOC63_RS10755 (FOC63_10755) - 2148803..2149213 (-) 411 WP_009854395.1 peptide deformylase -
  FOC63_RS10760 (FOC63_10760) - 2149210..2149719 (-) 510 WP_009854396.1 GNAT family N-acetyltransferase -
  FOC63_RS10765 (FOC63_10765) gdhA 2149986..2151335 (-) 1350 WP_009854398.1 NADP-specific glutamate dehydrogenase -
  FOC63_RS10770 (FOC63_10770) - 2151582..2152079 (+) 498 WP_009854399.1 DUF308 domain-containing protein -
  FOC63_RS10775 (FOC63_10775) queF 2152136..2152627 (-) 492 WP_009854400.1 preQ(1) synthase -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67036.99 Da        Isoelectric Point: 5.9917

>NTDB_id=397173 FOC63_RS10745 WP_009854393.1 2146370..2148184(-) (rcrP) [Streptococcus gallolyticus strain FDAARGOS_755]
MLKILKRLTAKEVTMLIFAVLFVCLNVYLELKIPDYMSDITTLLSTEGTKVKDIFAWNFDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLNFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGIQVITKGPIMAIWAITKIADKNH
EWLLVLIVAVAVMFLMIIFLLMMVMPKQRMIQTLTDKLNSITRESLTGIRVVRAYNAEDYQDAKFAQANDNVTNLNLFIG
RSMALLSPVMTGISSGMTLAIYWIGAHLIENIAIPTDPTKIAGAMQDKVDLFSDMVVYSSYAMQVVMGFMMMIVVFFILP
RAVVAAGRINEVLETKSSIEYPETNQAKPTEKGSVEFDNVSFRYSKNSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGIDVRQYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGESNSSPLDDDKMWEALDLAQGKTFVEM
KDGKLKAPVAQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNDVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=397173 FOC63_RS10745 WP_009854393.1 2146370..2148184(-) (rcrP) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGTTAAAAATTTTGAAACGCTTAACAGCAAAAGAAGTTACAATGCTTATTTTTGCTGTATTATTTGTGTGTTTGAATGT
TTATCTTGAGTTAAAAATTCCAGATTATATGTCGGATATCACGACCTTGCTATCAACAGAAGGGACAAAAGTAAAAGATA
TTTTTGCTTGGAACTTTGATGCACCAGGTATGCGTATGGTCTTGCTTTCTTTGGGAAGCTTTGCGGCATCTGTCGTTGTC
GGTTTCCTAGCTGCTCGTATTGCGGCAAGTTTTAGTACACGCCTACGTGATGATATTTTCCATAGTGTCTTGAATTTTTC
AGATGCTGAAATCAAGAAATTTTCAATTCCTAGTCTTTTGACACGTACAACCAATGATATTACACAAATTCAATTGGTTT
TCACAATGGGAATCCAAGTCATTACTAAAGGACCTATCATGGCAATTTGGGCAATAACCAAGATTGCTGATAAAAATCAT
GAATGGTTATTGGTTCTTATCGTCGCAGTTGCGGTTATGTTCTTGATGATCATTTTCTTGTTGATGATGGTGATGCCTAA
ACAACGCATGATTCAAACATTAACCGATAAATTGAACAGTATTACGCGAGAATCATTGACAGGTATCCGTGTGGTGCGTG
CATACAATGCCGAAGATTATCAAGATGCCAAATTTGCACAAGCCAATGATAATGTTACCAATCTTAACCTCTTTATTGGA
CGTTCAATGGCGTTGTTATCTCCAGTAATGACAGGAATTTCAAGCGGAATGACACTTGCTATTTACTGGATTGGTGCGCA
TTTGATTGAAAATATTGCTATTCCGACAGACCCAACGAAAATTGCTGGCGCTATGCAAGATAAAGTTGATTTGTTTTCAG
ATATGGTTGTTTATTCATCATATGCCATGCAAGTTGTTATGGGATTCATGATGATGATTGTCGTATTCTTCATTTTACCT
CGTGCCGTTGTTGCTGCTGGGCGTATTAATGAAGTTCTTGAAACAAAATCTTCAATTGAATATCCAGAAACAAATCAAGC
TAAACCAACTGAAAAAGGTTCTGTTGAATTTGACAATGTTTCATTCCGTTACAGCAAAAATTCAGAAGCTGTTTTGGAAC
ACGTTTCCTTTAAAGCGAAAGCTGGAGACACGGTTGCCTTTATTGGTTCAACTGGTTCTGGTAAATCAACTTTGGTGAAC
TTGATTCCACGTTTTTATGACGCGACAGAAGGAACGATTAAAGTCGATGGCATTGATGTTCGTCAATATGACCACGATAC
GCTTCATAAGATTGTTGGTTATATTCCGCAAAAAGCAGTGCTTTTCAGTGGGGATATCGCTTCAAATATGGATATGGGAG
AAAGCAATAGCTCGCCGCTTGATGATGACAAGATGTGGGAAGCTCTTGATTTAGCTCAAGGTAAGACATTCGTTGAAATG
AAAGACGGTAAGTTAAAAGCACCTGTTGCTCAAGGTGGTCAAAACTTCTCAGGTGGTCAAAAACAACGTTTGGCAATTGC
GCGTGCTCTTGCTCGTAAGCCTGAAATTATCATCTTTGATGATTCGTTCTCAGCACTTGACTACAAGACTGACCGAATCC
TCCGTTCACAGTTGAAAGAACGTACAGCTGATATGACGAAATTAATCGTGGCACAACGTATCTCAACGATTATGGACGCT
GACCAAATTTTGGTCTTGGATGAAGGTAAAGTTGTTGGTCAAGGTACGCACGAAGAATTGCTTGCAAACAACGATGTTTA
TCGTGAAATTGCTTACTCACAACTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(372-522)

ABC transporter transmembrane region (ABC_membrane)

(17-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1I7HK26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.942

100

0.671