Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   FOC63_RS02410 Genome accession   NZ_CP054015
Coordinates   490948..493284 (-) Length   778 a.a.
NCBI ID   WP_009854936.1    Uniprot ID   -
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 485948..498284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS02390 (FOC63_02390) nadA 487025..487945 (+) 921 WP_009854932.1 quinolinate synthase NadA -
  FOC63_RS02395 (FOC63_02395) - 488364..488612 (+) 249 Protein_478 helix-turn-helix domain-containing protein -
  FOC63_RS02400 (FOC63_02400) - 488668..489357 (+) 690 WP_009854934.1 hypothetical protein -
  FOC63_RS02405 (FOC63_02405) - 489350..490900 (+) 1551 WP_009854935.1 ATP-binding cassette domain-containing protein -
  FOC63_RS02410 (FOC63_02410) mutS/mutS2 490948..493284 (-) 2337 WP_009854936.1 endonuclease MutS2 Machinery gene
  FOC63_RS02415 (FOC63_02415) - 493390..493938 (-) 549 WP_009854937.1 CvpA family protein -
  FOC63_RS02420 (FOC63_02420) zapA 493941..494249 (-) 309 WP_009854938.1 cell division protein ZapA -
  FOC63_RS02425 (FOC63_02425) rnhC 494371..495273 (+) 903 WP_009854939.1 ribonuclease HIII -
  FOC63_RS02430 (FOC63_02430) lepB 495290..495883 (+) 594 WP_009854940.1 signal peptidase I -
  FOC63_RS02435 (FOC63_02435) - 496001..498194 (+) 2194 Protein_486 ATP-dependent RecD-like DNA helicase -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87697.11 Da        Isoelectric Point: 6.3768

>NTDB_id=397086 FOC63_RS02410 WP_009854936.1 490948..493284(-) (mutS/mutS2) [Streptococcus gallolyticus strain FDAARGOS_755]
MNNRILEQLEFDKVKQLFAGYLQTEQGQDELRKLEPMTEPDRISRSFDEMSDMEQIFIEHHSFGMGSLRDISESMRRLEL
DADVNISEIIDIKKVLQVSAEIKHFYNDLENVELSALNTLFEKIELLPSLQGSLQAINDGGFIENFASSELDRIRRQINH
DEGRVRQILQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENNAIVPQLSADKTVQLLQARHPLLTNPVANDLHFLNE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD
KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEEQTHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKASAKAQEIVDKAMAESEEILKNLHDRASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIVVTAYG
QRGTLVNQGKNGKWEVQVGLIKMTLKEDEFTLVKVQEEAQKPKKKQVNVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGRGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=397086 FOC63_RS02410 WP_009854936.1 490948..493284(-) (mutS/mutS2) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGAACAACAGAATTTTAGAACAGTTAGAATTTGATAAAGTCAAGCAACTTTTTGCTGGCTATTTACAGACTGAGCAAGG
CCAAGACGAGTTACGTAAACTTGAGCCAATGACTGAGCCTGACCGCATTTCACGTTCTTTTGATGAAATGTCGGACATGG
AACAGATTTTCATTGAACACCATTCTTTTGGAATGGGCAGTTTGCGTGACATTTCTGAAAGTATGCGTCGCTTGGAATTG
GATGCTGACGTTAATATCTCAGAAATTATCGACATCAAGAAAGTCTTGCAAGTCTCAGCTGAAATCAAACATTTTTATAA
TGATTTGGAAAATGTAGAGTTGTCTGCATTAAATACTCTTTTTGAGAAGATTGAATTGTTGCCAAGTCTGCAAGGTAGCT
TACAAGCGATTAATGACGGTGGTTTCATTGAAAATTTTGCAAGTTCAGAATTGGACCGTATTCGTCGCCAAATCAATCAT
GACGAAGGTAGAGTTCGTCAAATTTTGCAGGATATTTTGAAAAAACAAGCTGATCATTTGACAGAGACTCTGATTGCTAG
TCGTAATGGTCGTGCGGTTTTGCCTGTGAAAAATAGCTACCGCAACCGTATTTCAGGGGTTGTGCATGATATTTCGGCAT
CAGGAAGTACGGTTTATATTGAACCGCGCGCAGTAGTGCAACTTAATGAAGAAATCACGCAATTGCGAGCAGATGAACGT
CACGAAATGGCACGTATTTTACGTGAATTGTCAAATATGCTTCGCCCACATACTAATATTATTCGTAACAATGCGTGGGT
TTTAGGGCATTTGGATTTTGTTCGTGCTAAGTTCCTCTTCATGCAGGAAAACAACGCAATCGTGCCACAATTATCAGCAG
ATAAAACCGTGCAACTATTGCAAGCTCGCCACCCGCTTTTGACCAATCCAGTTGCCAATGACCTTCATTTTCTTAACGAA
TTGACCGTTATTGTTATTACAGGACCAAATACTGGTGGTAAGACAGTCATGTTGAAAACATTGGGCTTAGCGCAGCTTAT
GGCACAATCAGGTTTGCCAATCTTGGCTGACAAAGGTAGTAAAGTTGCCGTATTTAATGAGATTTTTGCAGATATTGGCG
ATGAGCAATCTATCGAACAAAGTTTGTCAACATTTTCAAGTCATATGACAAATATTGTTGAGATTTTGGCAGCCGCAGAT
AAAGATAGTCTTGTCTTGGTCGATGAATTGGGAGCAGGAACTGACCCGCAAGAAGGTGCCAGTCTTGCGATTGCTATTCT
TGAACACCTTCGCCTCATGGAAATTAAAACCATGGCAACGACACATTATCCAGAATTGAAAGCTTACGGTATTGAGACAG
AATTTGTGGAAAATGCCAGTATGGAATTTGATACAGAGACGTTAAGTCCGACTTATCATTTTATGCAAGGTGTACCAGGG
CGCTCAAATGCCTTTGAAATTGCTCGTCGTCTTGGTTTAGCAGAGATTATTGTCAATGAAGCAGAGCGTTTGACGGATTC
TGATACGGATGTTAACCGCATCATCGAGCGTTTGGAAGAACAAACCCATGAAAGCCGTAAACGCCTTGACCATATCAAAG
AAGTGGAACAAGATAACCTCAAATTCAATCGTGCGGTCAAGAAACTTTACAACGAATTTTCACATGCCAAGGACAAAGAA
CTTGAAAAAGCTAGCGCCAAAGCGCAAGAAATTGTGGATAAAGCCATGGCAGAGAGTGAAGAAATTCTCAAAAATCTTCA
TGATAGAGCAAGCCTTAAACCGCATGAAGTTATTGAAGCCAAAAGTCAGCTGAAAAAATTGGCGCCTGAAGTTGATTTGT
CGAAAAATAAAGTCCTCAAGAAAGCTAAAAAATTGCGCGCACCGCGTGTGGGTGATGACATTGTCGTCACAGCTTACGGA
CAACGCGGAACATTGGTTAACCAAGGGAAAAACGGGAAATGGGAAGTGCAAGTTGGTCTTATTAAAATGACACTTAAAGA
GGACGAATTTACCCTTGTTAAAGTTCAAGAGGAAGCCCAAAAGCCGAAGAAAAAACAAGTCAATGTGGTCAAGAAAAGCA
AAAAATCAGCTGGTCCACGTGCCCGTCTTGATCTTCGTGGTAAACGCTATGAAGAAGCCATGCAAGAATTGGATGAATTT
ATCGACCAAGCCTTGCTAAATAACATGGCACAAGTCGATATTATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGTGT
CACAAAATACCTTCGCCGCAACAAACACGTCAAATCATTTGGTTACGCCCCACAAAACGCAGGTGGCAGAGGCTGCACCA
TTGCAAACCTAGGGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.013

100

0.416