Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC73_RS02425 Genome accession   NZ_CP053998
Coordinates   537234..539102 (-) Length   622 a.a.
NCBI ID   WP_002884255.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 532234..544102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS02405 (FOC73_02405) - 533412..533516 (-) 105 Protein_483 conjugal transfer protein -
  FOC73_RS02415 (FOC73_02415) - 534912..535187 (-) 276 WP_254388432.1 hypothetical protein -
  FOC73_RS02420 (FOC73_02420) - 535620..537143 (+) 1524 WP_002884268.1 ATP-binding cassette domain-containing protein -
  FOC73_RS02425 (FOC73_02425) rcrQ 537234..539102 (-) 1869 WP_002884255.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS02430 (FOC73_02430) - 539092..540837 (-) 1746 WP_002884727.1 ABC transporter ATP-binding protein -
  FOC73_RS02435 (FOC73_02435) gshAB 541648..543912 (+) 2265 WP_002884655.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68766.15 Da        Isoelectric Point: 4.9887

>NTDB_id=396865 FOC73_RS02425 WP_002884255.1 537234..539102(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFVLIVVASLATVNLTASIQSLVDVYVQPMLKSGSHDFGPLLRFLTSVAVF
CLIGVIANYVSSLLMATISQDSLRSLRNQLFARMQKLPVRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTAITLI
GVTVTMLTVSPLLFIVVLVMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYANVLMPILGNLGNVSFVLTALVGGLFALNGVGGLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEPEEVDQGKVTLVNYELVDGQMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
DVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIAENIAYG
RADATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=396865 FOC73_RS02425 WP_002884255.1 537234..539102(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
ATGCAGAATAAGAAAAAAGCTAATTGGGGCTCTCTAGCACGTCTTCTACGCTTTTTGTGGCAAGACTACAAACTTTCGCT
TTCTATCGCCTTTGTCCTTATTGTGGTTGCTTCCTTGGCAACTGTCAATTTGACAGCGTCTATTCAGTCCTTGGTTGACG
TTTACGTTCAGCCCATGCTCAAATCTGGCAGCCATGACTTTGGACCACTGTTACGGTTCTTGACCTCAGTCGCTGTCTTC
TGTCTTATCGGTGTGATTGCCAACTATGTGTCATCACTCCTCATGGCGACGATTTCGCAAGATTCTCTACGTTCCCTTCG
TAATCAGCTCTTTGCTCGTATGCAAAAGCTTCCTGTTCGCTACTTTGACACTCACCAACACGGTGACATCATGTCTATCT
ACACCAACGACATCGATGCTCTCCGTCAGGCTGTTGAGCAATCCATTCCACAGTTGCTACAAACGGCTATTACCCTTATC
GGGGTAACAGTGACAATGCTTACGGTTAGTCCTCTCCTCTTTATCGTGGTTCTAGTCATGGTAGGCATCATGTTTATGGT
CATCAAAAATGTATCAGCCAAATCAGGCCGTTACTTCGGTGAACAACAAAAGAATTTGGGGATTGAGAATGGTTTCATCG
AGGAAATGATGTCAGGTCAAAAAGTGGTCAAGGCCTTTGTTCACGAAGAAGAAAGCATGGCTGATTTTGACAAGATTAAC
GAGCAACTCTTTGAATCTTCTTACTTGGCCAACCGCTATGCCAATGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACCGCCTTGGTTGGTGGACTCTTTGCCCTTAATGGTGTCGGTGGTTTGACTATCGGTGGTCTCATGG
CCTTCCTACAATTGAACCGTTCCTTCAACGGACCTATTACTCAGGTCTCTCAACAACTGAACTTTGTTCTTATGGCACTT
GCTGGTGCTGACCGTATCTTTGACCTCTTGGATGAGCCAGAAGAAGTAGACCAAGGTAAGGTCACTTTGGTCAACTACGA
ATTGGTAGATGGTCAGATGGTTGTGACAGACAAGAAAACCAATCTCTGGGCTTGGAAACACCCACGTCCAAATGGCGACT
ACGAATTGGTCGAGTTGGTCGGAAATGTGGTCTTCCAAGACGTTGATTTCTCTTACGATGGTAAGAAACAAATCCTTCAT
GACGTTAATCTCTATGCAGACAAGGGGCAAAAGGTAGCCTTTGTGGGTGCGACAGGTGCTGGTAAGACGACGATTACCAA
CTTGATTAACCGTTTCTACGATATCCAATCTGGTGTGATTACTTATGATGGTATTGATGTCAAGCTGATTGAGAAAGATT
CTCTTCGTCGCTCACTTGGTATCGTGCTTCAAGATACCCATCTCTTCACGGGAACTATCGCTGAAAATATTGCCTATGGT
CGTGCCGATGCGACACGTGAGGAAATTCTTGAAGCTGCCCGTATTGCTAACGTGGATTCCTTTGTGCAACACTTGGATAA
TGGGTATGACACTGTTCTTACAGATGACGGTGCAGGCTTGTCTAATGGGCAACGTCAGCTTATCGCCATTGCGCGTGCTG
CCCTTGCCAATGCACCGGTTCTTATCCTTGACGAGGCGACATCCTCTATTGACTCTCGTACCGAAAAAATGGTGCAAGAG
GGGATGGACCGACTTATGGAAGGACGTACGGTCTTCGTTATTGCCCACCGTCTTTCAACCATTGTTAACTCTGACGTTAT
CATGGTTATGGACCACGGACGAATCATTGAACGTGGTGACCACGACAGCCTTATGGAGCAAGGTGGTACTTATTACCGAC
TCTATACTGGTGGTCTTGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-305)

ABC transporter (ABC_tran)

(399-548)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.073

98.875

0.367