Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC73_RS01535 Genome accession   NZ_CP053998
Coordinates   335656..337404 (-) Length   582 a.a.
NCBI ID   WP_002885158.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 330656..342404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS01510 (FOC73_01510) dltD 331027..332295 (-) 1269 WP_002885157.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
  FOC73_RS01515 (FOC73_01515) dltC 332288..332527 (-) 240 WP_002891149.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  FOC73_RS01520 (FOC73_01520) dltB 332545..333792 (-) 1248 WP_004182111.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  FOC73_RS01525 (FOC73_01525) dltA 333789..335339 (-) 1551 WP_004182015.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  FOC73_RS01530 (FOC73_01530) - 335348..335479 (-) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  FOC73_RS01535 (FOC73_01535) rcrQ 335656..337404 (-) 1749 WP_002885158.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS01540 (FOC73_01540) - 337394..339133 (-) 1740 WP_004182062.1 ABC transporter ATP-binding protein -
  FOC73_RS01545 (FOC73_01545) - 339164..339775 (-) 612 WP_037597899.1 lysozyme family protein -
  FOC73_RS01550 (FOC73_01550) - 339777..340754 (-) 978 WP_004182031.1 nucleoid-associated protein -
  FOC73_RS01555 (FOC73_01555) glyA 340760..342010 (-) 1251 WP_004182100.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65436.92 Da        Isoelectric Point: 7.0651

>NTDB_id=396860 FOC73_RS01535 WP_002885158.1 335656..337404(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
MKARNNKSTLKRLSRDILSQRYLFALATVGTIIQVALTVYLPILIGDAVDAVLKMNAVLLMSRLIWQMLVVILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAMPLSYLDRQGTGDMVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVARFIAKKSYQLYRNQTKWRGMQTQLIEESLTQEALIQSLNAQDQMVRSFKDVNGKYADYSQG
AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGAFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEEEITETGKVVLEEADVQGRFQFDHVQFGYLPNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGNIL
LDGRPITDYTRESLRKQIGMVLQETWLEVGTIHDNIAYGNPEASREEVIAAAKAANADFFIQQLPQGYDTYLNDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
EQLMQAKGMYYRMQTAQKTQNS

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=396860 FOC73_RS01535 WP_002885158.1 335656..337404(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
ATGAAGGCTAGAAATAATAAATCAACGCTTAAACGTTTAAGTAGAGATATCTTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTATTCAAGTTGCCTTAACGGTTTACTTACCTATCTTAATTGGTGATGCAGTGGACGCTGTTCTTA
AGATGAACGCCGTTCTATTGATGTCACGTTTAATTTGGCAGATGCTTGTAGTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTAATTTATTCATATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATGCCACTTAGTTATCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGTGTGACTACAGATAGCGATCAGTTAAACA
ACGGACTTCTCATGGTCTTTAACCAATTTTTCGTTGGGCTTTTGACTATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTATTAGTTCTAGTGATGACGCCTTTGTCAATGCTTGTGGCACGTTTTATCGCAAAGAAGAGCTA
CCAACTCTATCGCAATCAAACTAAATGGAGAGGCATGCAGACTCAGTTGATTGAGGAAAGTTTGACTCAAGAAGCTTTAA
TACAGAGTCTAAATGCTCAAGACCAGATGGTTAGGAGTTTTAAAGACGTCAATGGTAAGTATGCTGATTATTCACAGGGC
GCTATCTTTTATTCGTCAGCAGTTAACCCCGCTACACGCTTTGTCAATAGTCTGATATATGCTCTTATTGCTGGTGTTGG
TGCCTATCGTATCATGTCGGGTGGCGCTTTTACAGTGGGACAATTGACTACCTTCCTAAATTATGTGACTCAGTATACGA
AACCTTTTAATGATATCTCATCTGTTCTATCTGAACTTCAAAGTGCTTTGGCCTGTGCTGATCGCCTTTATATGATATTG
GATGAAGAGGAAATAACAGAAACAGGTAAGGTGGTCTTGGAAGAAGCAGATGTGCAGGGACGTTTTCAATTTGACCATGT
CCAATTTGGTTATTTGCCTAATAAACCTCTTATCAAGGATTTGAGCATTGATATCCCTGCCGCAAGTACTGTTGCCATTG
TTGGCCCTACAGGAGCGGGAAAATCTACTCTGATTAACCTACTTATGCGTTTCTATGATTTGGACAAGGGGAACATTCTA
CTGGACGGTAGACCTATTACAGATTATACCCGTGAGAGTCTTCGGAAACAGATTGGGATGGTTTTGCAGGAAACTTGGCT
TGAGGTCGGTACTATTCATGATAATATTGCCTATGGAAATCCAGAAGCCAGTCGTGAAGAAGTTATAGCAGCGGCCAAGG
CTGCCAATGCAGATTTCTTTATTCAGCAGTTGCCTCAAGGCTATGACACCTACTTGAATGACGCTGGGCAATCCCTTTCT
CAGGGACAACGTCAGCTTTTGACCATTGCTCGCATTTTTGTCAATGTGCCTAAAATCTTAATCTTGGATGAAGCCACTTC
TAGCATCGATACCCGTACAGAGCTCCTCATTCAAGAGGCCTTCGCTAAATTAATGAAAGGTCGAACAAGTTTCATCATTG
CCCATCGATTGTCTACCATCGAAAATGCGGACCTTATTTTGGTCATGAATAATGGGGATATCGTTGAACACGGAACCCAT
GAACAACTGATGCAAGCTAAGGGAATGTACTACCGTATGCAGACGGCCCAAAAGACACAAAATAGTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.396

100

0.387