Detailed information NTG0395826

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GFM36_RS09180
• Genome accession: NZ_CP045645
• Coordinates: 1905758..1906459 (+)
• Length: 233 a.a.
• NCBI ID: WP_020753089.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH1056
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1900758..1911459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFM36_RS09145 (GFM36_09195)	kdsB	1901281..1902042 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GFM36_RS09150 (GFM36_09200)	-	1902054..1903034 (+)	981	WP_038346636.1	DNA polymerase III subunit delta'	-
GFM36_RS09155 (GFM36_09205)	-	1903046..1903387 (+)	342	WP_020753088.1	PilZ domain-containing protein	-
GFM36_RS09160 (GFM36_09210)	-	1903405..1904178 (+)	774	WP_000497298.1	TatD family hydrolase	-
GFM36_RS09165 (GFM36_09215)	-	1904216..1904824 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
GFM36_RS09170 (GFM36_09220)	-	1904834..1905388 (+)	555	WP_000841373.1	type II secretion system protein	-
GFM36_RS09175 (GFM36_09225)	xcpV	1905378..1905758 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
GFM36_RS09180 (GFM36_09230)	xcpW	1905758..1906459 (+)	702	WP_020753089.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GFM36_RS09185 (GFM36_09235)	gspK	1906459..1907418 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
GFM36_RS09190 (GFM36_09240)	-	1907648..1908244 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
GFM36_RS09195 (GFM36_09245)	ung	1908295..1909008 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
GFM36_RS09200 (GFM36_09250)	-	1909005..1910129 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
GFM36_RS09205 (GFM36_09255)	tadA	1910136..1910639 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
GFM36_RS09210 (GFM36_09260)	-	1910709..1911152 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26599.56 Da
• Isoelectric Point: 9.5501

>NTDB_id=395826 GFM36_RS09180 WP_020753089.1 1905758..1906459(+) (xcpW) [Acinetobacter baumannii strain XH1056]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=395826 GFM36_RS09180 WP_020753089.1 1905758..1906459(+) (xcpW) [Acinetobacter baumannii strain XH1056]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987