Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | DLI71_RS12410 | Genome accession | NZ_CP045528 |
| Coordinates | 2559215..2559640 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain 6507 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2554215..2564640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLI71_RS12380 (DLI71_12380) | - | 2555331..2556041 (-) | 711 | WP_000736399.1 | heteromeric transposase endonuclease subunit TnsA | - |
| DLI71_RS12385 (DLI71_12385) | - | 2556198..2556833 (+) | 636 | Protein_2453 | lipase family alpha/beta hydrolase | - |
| DLI71_RS12390 (DLI71_12390) | rplS | 2556886..2557254 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| DLI71_RS12395 (DLI71_12395) | trmD | 2557463..2558203 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| DLI71_RS12400 (DLI71_12400) | rimM | 2558249..2558797 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| DLI71_RS12405 (DLI71_12405) | rpsP | 2558817..2559068 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| DLI71_RS12410 (DLI71_12410) | pilE | 2559215..2559640 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| DLI71_RS12415 (DLI71_12415) | pilY2 | 2559637..2560119 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| DLI71_RS12420 (DLI71_12420) | pilY1 | 2560132..2563986 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=394879 DLI71_RS12410 WP_000788342.1 2559215..2559640(-) (pilE) [Acinetobacter baumannii strain 6507]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=394879 DLI71_RS12410 WP_000788342.1 2559215..2559640(-) (pilE) [Acinetobacter baumannii strain 6507]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |