Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   GE021_RS09035 Genome accession   NZ_CP053792
Coordinates   1842395..1844731 (-) Length   778 a.a.
NCBI ID   WP_164406424.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_77_1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1837395..1849731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS11575 - 1838708..1839001 (-) 294 WP_093998844.1 hypothetical protein -
  GE021_RS09020 (GE021_009010) mutY 1839173..1840336 (+) 1164 WP_164406426.1 A/G-specific adenine glycosylase -
  GE021_RS09025 (GE021_009015) trxA 1840434..1840748 (-) 315 WP_003045187.1 thioredoxin -
  GE021_RS09030 (GE021_009020) - 1840975..1842294 (+) 1320 WP_003045190.1 FAD-containing oxidoreductase -
  GE021_RS09035 (GE021_009025) mutS/mutS2 1842395..1844731 (-) 2337 WP_164406424.1 endonuclease MutS2 Machinery gene
  GE021_RS09040 (GE021_009030) - 1844895..1845440 (-) 546 WP_003045194.1 CvpA family protein -
  GE021_RS09045 (GE021_009035) - 1845443..1845751 (-) 309 WP_003045196.1 hypothetical protein -
  GE021_RS09050 (GE021_009040) rnhC 1845898..1846806 (+) 909 WP_093999376.1 ribonuclease HIII -
  GE021_RS09055 (GE021_009045) lepB 1846817..1847410 (+) 594 WP_003045201.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87240.99 Da        Isoelectric Point: 6.8615

>NTDB_id=394651 GE021_RS09035 WP_164406424.1 1842395..1844731(-) (mutS/mutS2) [Streptococcus canis strain HL_77_1]
MDKKILEQLDFDKVKEHFRTYLQTEQGSRELDQLEPLTNHDKIKHSFLEIEEMAAIFVEQHSFALGSLSDISVSMRRLEL
EADLNITELLAVKKLLQVSAEASRFYTELENVELKALKLLFEKLELFPNLQGGLQAINDSGFVESFASPELEKIRRSISD
KEHASRQVLQEILKKQADYLSESLIASRNGRSVLPVKNTFRNKVAGVVHDMSASGNTVYIEPRALVQLNEELTQLQAAER
YEVARVLQELSDMLRPHSRALANNAWLLGHLDFVRAKYLYLQDKKATVPTISDDKSLQLLNVRHPLLQNPVANDLHFSKD
LAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFNGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
TESLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETPYVENASMEFDSISLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVNEAQSMTDTDSDVNRIIEQLEKQTLESRKRLDHIKEVEQDNLKFNRAVKKLYHDFSQAKDKE
IEKARLEAREIVDMALAESDSILSRLHDKAALKPHEVIEAKGQLKQLVPERDLAQNKVLKKAKQLRAPRVGDDIIVMAYG
QRGTLVKELKDKRWESQVGLIKMTLSEDEFSLVKVVEEAQKPKKKPVKVVKKATAGTGPRARLDLRGKRYEEAMQELDSF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=394651 GE021_RS09035 WP_164406424.1 1842395..1844731(-) (mutS/mutS2) [Streptococcus canis strain HL_77_1]
ATGGATAAAAAGATTTTAGAACAGTTAGACTTTGACAAGGTTAAGGAACACTTTCGGACTTACTTGCAAACAGAGCAAGG
TAGCCGTGAGTTGGACCAACTGGAGCCCTTAACCAATCATGACAAAATCAAACATTCTTTTTTAGAGATCGAGGAGATGG
CTGCTATTTTTGTGGAGCAGCATAGCTTTGCTTTAGGAAGCCTATCAGATATTTCGGTTAGCATGCGACGTCTGGAATTA
GAAGCCGATTTAAACATTACTGAATTGTTGGCGGTCAAAAAATTGCTGCAGGTATCAGCTGAAGCTAGCCGTTTTTACAC
TGAGTTAGAAAATGTTGAACTCAAGGCTCTAAAGCTTTTATTTGAGAAGTTAGAGCTCTTTCCTAACCTCCAAGGCGGCC
TTCAGGCGATTAATGATAGCGGTTTTGTGGAAAGTTTTGCTAGCCCAGAATTAGAAAAGATTCGCCGCAGTATTTCAGAT
AAAGAGCATGCCAGTCGTCAAGTGTTACAGGAGATCCTCAAAAAACAGGCTGACTATTTGTCAGAAAGTTTGATTGCTAG
TCGAAATGGACGCAGCGTCTTACCTGTCAAAAACACTTTTCGTAATAAGGTGGCTGGAGTGGTTCACGATATGTCAGCTT
CTGGTAATACAGTCTATATTGAACCAAGAGCCCTTGTGCAGCTGAATGAAGAATTGACACAGTTGCAGGCAGCTGAGCGC
TATGAGGTGGCGCGTGTCCTTCAAGAATTATCAGACATGCTTCGTCCTCACAGTCGGGCTCTTGCAAATAATGCTTGGTT
GTTGGGGCATTTGGATTTTGTTCGGGCTAAGTACCTTTATCTGCAAGACAAAAAGGCAACGGTTCCAACCATTTCAGATG
ACAAAAGTTTACAGTTGTTAAATGTGCGCCACCCTCTTTTGCAAAATCCTGTTGCCAACGATTTGCATTTTTCTAAAGAC
TTAGCTGTTATTGTCATTACAGGTCCTAATACAGGTGGGAAGACCATTATGTTGAAAACACTTGGTTTAGCACAGTTAAT
GGCACAATCTGGACTTCCTATTTTGGCTGACAAAGGTTCCAAGGTGGCTGTTTTTAATGGTATTTTTGCGGACATCGGAG
ATGAGCAGTCGATTGAGCAGAGCTTGTCAACCTTCTCCAGTCACATGACGCATATTGTGGCTATTTTGAATCAGGCTGAC
ACAGAAAGTTTGGTGCTCTTTGACGAATTGGGGGCAGGCACGGATCCCCAAGAAGGGGCTAGTTTAGCTATGGCCATTCT
GGAACAATTACGTTTGACCAATATTAAAACCATGGCAACCACGCATTATCCAGAATTAAAGGCTTATGGTATTGAAACAC
CCTACGTGGAAAATGCCAGCATGGAGTTTGACAGCATCAGCTTAAAACCAACTTACCGCTTTATGCAAGGGGTACCTGGC
CGATCAAACGCTTTTGAAATTGCTAGACGACTTGGTTTAGCAGAACACATCGTCAATGAAGCTCAAAGCATGACAGATAC
TGATAGTGATGTCAACCGCATTATTGAACAGCTGGAAAAACAAACCTTGGAAAGTCGTAAGCGTCTGGACCACATCAAAG
AAGTAGAGCAAGACAACCTCAAATTCAACCGTGCGGTTAAAAAGCTGTACCATGATTTTTCACAGGCCAAAGACAAGGAA
ATTGAAAAAGCAAGGCTTGAAGCTCGGGAAATTGTTGATATGGCCTTGGCAGAAAGTGACAGTATCCTAAGCCGATTGCA
TGATAAGGCTGCGCTCAAACCTCATGAAGTTATTGAAGCCAAGGGACAACTCAAACAACTCGTCCCAGAAAGAGATTTAG
CGCAAAACAAGGTTTTGAAAAAAGCCAAACAATTACGAGCTCCTCGTGTAGGAGATGACATTATTGTAATGGCATACGGG
CAACGCGGAACCTTGGTTAAAGAACTCAAGGACAAGAGATGGGAATCCCAAGTCGGTCTCATTAAAATGACTCTCAGTGA
AGACGAATTCAGCCTTGTTAAGGTTGTTGAAGAAGCACAAAAGCCTAAGAAAAAGCCAGTCAAGGTGGTTAAAAAAGCGA
CTGCCGGCACTGGACCACGTGCTCGTCTGGATTTGCGTGGGAAACGTTATGAGGAGGCCATGCAAGAACTTGACAGCTTT
ATCGATCAAGCACTATTAAACAATATGAGCCAAGTAGATATTATTCACGGTATTGGGACTGGTGTGATTCGTGAAGCCGT
TACCAAATACCTCAGACGAAACAAGCATGTCAAAAGCTTTGGCTATGCTCCACAAAATGCAGGTGGATCAGGGTGTACCA
TTGCCAATTTAGGTTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

Smr domain (Smr)

(703-776)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.849

100

0.406