Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   GE022_RS02465 Genome accession   NZ_CP053790
Coordinates   487823..488557 (+) Length   244 a.a.
NCBI ID   WP_003044324.1    Uniprot ID   A0A2D4DPJ6
Organism   Streptococcus canis strain HL_77_2     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 482823..493557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE022_RS02440 (GE022_002425) - 483253..483555 (-) 303 WP_003044336.1 DUF1827 family protein -
  GE022_RS02445 (GE022_002430) - 483606..484061 (-) 456 WP_159304848.1 NUDIX hydrolase -
  GE022_RS02450 (GE022_002435) clpE 484188..486479 (-) 2292 WP_164405415.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  GE022_RS02455 (GE022_002440) - 486780..487010 (+) 231 WP_002983885.1 YkuJ family protein -
  GE022_RS02460 (GE022_002445) - 487137..487823 (+) 687 WP_099983090.1 amino acid ABC transporter permease -
  GE022_RS02465 (GE022_002450) amiE 487823..488557 (+) 735 WP_003044324.1 amino acid ABC transporter ATP-binding protein Regulator
  GE022_RS02470 (GE022_002455) - 488768..489247 (+) 480 WP_164228496.1 FeoA family protein -
  GE022_RS02475 (GE022_002460) - 489244..489345 (+) 102 Protein_432 FeoB small GTPase domain-containing protein -
  GE022_RS02485 (GE022_002470) - 489900..490688 (+) 789 WP_003044313.1 TrmB family transcriptional regulator -
  GE022_RS02490 (GE022_002475) - 490717..491574 (+) 858 WP_003044310.1 sulfite exporter TauE/SafE family protein -
  GE022_RS02495 (GE022_002480) - 491592..492587 (+) 996 WP_164227797.1 ornithine cyclodeaminase family protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26746.01 Da        Isoelectric Point: 4.6223

>NTDB_id=394494 GE022_RS02465 WP_003044324.1 487823..488557(+) (amiE) [Streptococcus canis strain HL_77_2]
MTEAIISIKDLHKYYDHNEVLKGIDLDIMPGEVVVIIGPSGSGKSTLLRTMNLLEVPTKGQISFEGVDITDKKNDIFSMR
EKMGMVFQQFNLFSNMTVLENITLSPIKTKGMAKAEADKTALNLLDKVGLSEKAKAYPASLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAKEVADRVIFMDGGVIVEEGNPSQLFDQTKEDRTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=394494 GE022_RS02465 WP_003044324.1 487823..488557(+) (amiE) [Streptococcus canis strain HL_77_2]
ATGACTGAGGCTATTATTTCAATTAAAGACTTGCACAAGTATTATGATCACAATGAAGTGCTTAAAGGAATTGATTTAGA
CATCATGCCAGGAGAGGTTGTGGTGATTATCGGACCTTCTGGTTCTGGGAAATCAACCTTGCTTCGAACCATGAATCTTT
TGGAAGTACCGACCAAGGGACAGATTAGTTTTGAAGGGGTTGATATTACCGATAAGAAGAATGATATTTTTAGCATGCGC
GAAAAAATGGGAATGGTTTTCCAGCAGTTTAACCTCTTTTCCAATATGACTGTTTTAGAAAATATCACCTTATCGCCAAT
CAAAACCAAGGGAATGGCTAAAGCAGAGGCTGACAAAACAGCCTTGAACTTGTTGGACAAAGTTGGATTATCAGAAAAAG
CCAAGGCTTATCCTGCTAGCCTTTCTGGTGGGCAGCAGCAGCGGATTGCCATTGCGCGTGGACTAGCTATGGATCCAGAT
GTTTTACTCTTTGATGAACCAACTTCAGCCCTTGATCCTGAAATGGTGGGCGAGGTCTTAGCCGTTATGCAGGATTTGGC
TAAATCTGGGATGACCATGGTTATTGTGACTCATGAAATGGGCTTTGCCAAGGAAGTGGCTGACCGAGTCATCTTCATGG
ATGGTGGGGTTATTGTAGAAGAAGGCAACCCTAGCCAACTCTTTGACCAAACCAAAGAAGACCGGACCAAAGATTTTTTG
AGCAAGGTTTTATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DPJ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

33.46

100

0.361
  amiE Streptococcus thermophilus LMD-9

33.46

100

0.361
  amiE Streptococcus salivarius strain HSISS4

33.46

100

0.361

Multiple sequence alignment