Detailed information NTG0393799

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HP432_RS05475
• Genome accession: NZ_CP053730
• Coordinates: 944844..945869 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CP61_Sichuan
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 939844..950869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HP432_RS05445 (HP432_05450)	zapB	939928..940173 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
HP432_RS05450 (HP432_05455)	rraA	940258..940743 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
HP432_RS05455 (HP432_05460)	menA	940836..941762 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HP432_RS05460 (HP432_05465)	hslU	941829..943160 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
HP432_RS05465 (HP432_05470)	hslV	943170..943700 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
HP432_RS05470 (HP432_05475)	ftsN	943793..944752 (-)	960	WP_000068828.1	cell division protein FtsN	-
HP432_RS05475 (HP432_05480)	cytR	944844..945869 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
HP432_RS05480 (HP432_05485)	priA	946025..948223 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
HP432_RS05485 (HP432_05490)	rpmE	948426..948638 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
HP432_RS05490 (HP432_05495)	yiiX	948699..949307 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
HP432_RS05495 (HP432_05500)	metJ	949491..949808 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=393799 HP432_RS05475 WP_000644904.1 944844..945869(-) (cytR) [Escherichia coli strain CP61_Sichuan]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=393799 HP432_RS05475 WP_000644904.1 944844..945869(-) (cytR) [Escherichia coli strain CP61_Sichuan]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628