Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GA646_RS02120 | Genome accession | NZ_CP045127 |
| Coordinates | 273757..274392 (+) | Length | 211 a.a. |
| NCBI ID | WP_005180516.1 | Uniprot ID | N9MGL9 |
| Organism | Acinetobacter indicus strain XG03 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 268757..279392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GA646_RS02105 | - | 269018..269821 (+) | 804 | WP_104489989.1 | putative RNA methyltransferase | - |
| GA646_RS02110 | ponA | 269944..272520 (-) | 2577 | WP_104483912.1 | penicillin-binding protein PBP1a | - |
| GA646_RS02115 | - | 272692..273757 (+) | 1066 | Protein_245 | pilus assembly protein PilM | - |
| GA646_RS02120 | pilN | 273757..274392 (+) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| GA646_RS02125 | - | 274389..274775 (+) | 387 | Protein_247 | type 4a pilus biogenesis protein PilO | - |
| GA646_RS02130 | tnpA | 274814..275263 (-) | 450 | WP_160255430.1 | IS200/IS605 family transposase | - |
| GA646_RS02135 | - | 275336..276727 (+) | 1392 | WP_160255431.1 | RNA-guided endonuclease InsQ/TnpB family protein | - |
| GA646_RS02140 | pilO | 276763..277104 (+) | 342 | Protein_250 | type 4a pilus biogenesis protein PilO | - |
| GA646_RS02145 | pilP | 277104..277631 (+) | 528 | WP_045795346.1 | pilus assembly protein PilP | Machinery gene |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23494.92 Da Isoelectric Point: 7.9757
>NTDB_id=392079 GA646_RS02120 WP_005180516.1 273757..274392(+) (pilN) [Acinetobacter indicus strain XG03]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=392079 GA646_RS02120 WP_005180516.1 273757..274392(+) (pilN) [Acinetobacter indicus strain XG03]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGTTGGCATGGTTCTATTACAACCATAAACTGCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAATCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCTCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGTTGGCATGGTTCTATTACAACCATAAACTGCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAATCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCTCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |