Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   F1716_RS07890 Genome accession   NZ_CP045048
Coordinates   1447465..1447980 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni subsp. jejuni strain NADC 20827     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1442465..1452980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1716_RS07875 (F1716_07930) - 1442577..1444394 (-) 1818 WP_153257520.1 motility associated factor glycosyltransferase family protein -
  F1716_RS07880 (F1716_07935) - 1444391..1446214 (-) 1824 WP_153257521.1 motility associated factor glycosyltransferase family protein -
  F1716_RS07885 (F1716_07940) - 1446224..1447465 (-) 1242 WP_002864247.1 DUF2920 family protein -
  F1716_RS07890 (F1716_07945) ctsG 1447465..1447980 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  F1716_RS07895 (F1716_07950) tsaD 1447981..1448988 (-) 1008 WP_153257522.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  F1716_RS07900 (F1716_07955) - 1448985..1450379 (-) 1395 WP_100626175.1 M99 family carboxypeptidase catalytic domain-containing protein -
  F1716_RS07905 (F1716_07960) dxr 1450381..1451451 (-) 1071 WP_002864243.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  F1716_RS07910 (F1716_07965) cdsA 1451448..1452173 (-) 726 WP_002875269.1 phosphatidate cytidylyltransferase -
  F1716_RS07915 (F1716_07970) - 1452182..1452520 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=391503 F1716_RS07890 WP_002799196.1 1447465..1447980(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=391503 F1716_RS07890 WP_002799196.1 1447465..1447980(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment