Detailed information NTG0390225

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FSC12_RS14725
• Genome accession: NZ_CP044474
• Coordinates: 3066041..3067219 (+)
• Length: 392 a.a.
• NCBI ID: WP_163169686.1
• Uniprot ID: -
• Organism: Acinetobacter schindleri strain HZE33-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3061041..3072219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC12_RS14710 (FSC12_14815)	-	3062377..3063489 (+)	1113	WP_004895024.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
FSC12_RS14715 (FSC12_14820)	-	3063695..3064225 (+)	531	WP_163169685.1	hypothetical protein	-
FSC12_RS14720 (FSC12_14825)	-	3064747..3065796 (+)	1050	WP_004809523.1	3-deoxy-7-phosphoheptulonate synthase	-
FSC12_RS14725 (FSC12_14830)	pilU	3066041..3067219 (+)	1179	WP_163169686.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC12_RS14730 (FSC12_14835)	pilU	3067629..3068834 (+)	1206	WP_071320717.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC12_RS14735 (FSC12_14840)	-	3068894..3070072 (-)	1179	WP_163169794.1	MFS transporter	-
FSC12_RS14740 (FSC12_14845)	gcvH	3070301..3070675 (-)	375	WP_004809515.1	glycine cleavage system protein GcvH	-
FSC12_RS14745 (FSC12_14850)	-	3070748..3071776 (-)	1029	WP_163169687.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44568.24 Da
• Isoelectric Point: 6.5046

>NTDB_id=390225 FSC12_RS14725 WP_163169686.1 3066041..3067219(+) (pilU) [Acinetobacter schindleri strain HZE33-1]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADFPPSIKQQGLMKPFGQQKLAADKTRLFAYALMNERQIKEFESVMEC
NFGISVPGVSRFRVNVFQQQHNVGMVIRTITTEIPSFQQLGLPNSLQQVIMEKRGLVLIVGATCVGKSTTLAAMIDHRNT
YSEGHIITMEDPVEYVYQHKKSMITQREIGVDCVSWHNALINTMRQAPDVIVIGEIRDTESMEHAIAFAESGHLCLATLH
SNNADQALDRIINFFPEERRNQLLMDLSANMKAVISQRLIRIEDGQGRRAAVEILLNTPLVSDFIRKGDFYELKTIMARS
RELGMQTFDQALFDLYNQGIISYDEALRNADSSNEMRLQIKLKSSRINPALQEEGSRMTILEQSKETTLSRI

Nucleotide

• Length: 1179 bp

>NTDB_id=390225 FSC12_RS14725 WP_163169686.1 3066041..3067219(+) (pilU) [Acinetobacter schindleri strain HZE33-1]
ATGTATACACCCGAATTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTGACCAAAGTGGTTGAATATGGAGGTTC
CGATCTTTTTATTACCGCAGATTTTCCACCAAGTATCAAACAGCAGGGCTTGATGAAACCTTTTGGTCAGCAAAAACTGG
CAGCGGATAAAACCCGTTTGTTTGCCTATGCTTTAATGAATGAACGACAGATCAAGGAATTTGAATCAGTGATGGAATGC
AATTTCGGTATCAGTGTACCGGGTGTATCACGCTTCCGGGTCAATGTCTTTCAGCAACAGCATAATGTTGGGATGGTAAT
CAGAACCATTACTACGGAGATTCCAAGCTTTCAGCAATTAGGACTACCAAACTCTTTGCAACAAGTGATTATGGAAAAAC
GTGGGCTGGTTCTGATTGTAGGTGCGACATGTGTTGGTAAATCCACCACACTGGCAGCCATGATTGATCACCGCAATACC
TATTCTGAAGGACATATTATTACCATGGAAGATCCGGTGGAATACGTGTATCAACATAAAAAGTCCATGATTACCCAACG
TGAAATTGGCGTAGATTGTGTTTCCTGGCATAACGCGCTGATCAATACCATGCGTCAGGCACCGGATGTGATCGTGATTG
GTGAAATCCGGGATACCGAAAGTATGGAGCATGCGATTGCCTTTGCTGAATCCGGTCATCTGTGTTTGGCCACCCTGCAT
TCTAATAATGCCGATCAGGCTTTAGACCGCATTATTAATTTCTTCCCGGAAGAACGCCGCAATCAGCTGTTAATGGATTT
ATCCGCCAATATGAAAGCTGTGATTTCGCAACGTTTGATCCGTATCGAGGATGGGCAAGGTCGTCGTGCTGCCGTTGAAA
TTTTATTGAATACGCCGCTGGTGTCTGATTTTATCCGTAAAGGAGATTTTTACGAGCTGAAAACTATTATGGCGCGTTCG
CGTGAACTCGGCATGCAGACCTTTGATCAGGCATTATTTGATTTGTATAACCAGGGAATTATTTCTTATGACGAAGCTTT
GCGTAATGCGGATTCAAGTAATGAAATGCGTTTGCAGATCAAATTAAAAAGCAGTCGCATCAATCCCGCTCTTCAGGAAG
AAGGGAGTAGGATGACGATACTGGAACAATCCAAGGAAACTACACTTTCCAGAATCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (64-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.471	88.776	0.51
pilU	Acinetobacter baylyi ADP1	53.533	93.878	0.503
pilU	Vibrio cholerae strain A1552	49.577	90.561	0.449
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.814	85.204	0.365