Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | FSC02_RS13835 | Genome accession | NZ_CP044445 |
| Coordinates | 2878067..2878702 (-) | Length | 211 a.a. |
| NCBI ID | WP_005180516.1 | Uniprot ID | N9MGL9 |
| Organism | Acinetobacter indicus strain CMG3-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2873067..2883702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC02_RS13815 (FSC02_13870) | aroK | 2874046..2874588 (-) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
| FSC02_RS13820 (FSC02_13875) | pilQ | 2874625..2876763 (-) | 2139 | WP_171521979.1 | type IV pilus secretin PilQ | Machinery gene |
| FSC02_RS13825 (FSC02_13880) | pilP | 2876824..2877351 (-) | 528 | WP_045795346.1 | pilus assembly protein PilP | Machinery gene |
| FSC02_RS13830 (FSC02_13885) | pilO | 2877351..2878070 (-) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FSC02_RS13835 (FSC02_13890) | pilN | 2878067..2878702 (-) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| FSC02_RS13840 (FSC02_13895) | pilM | 2878702..2879760 (-) | 1059 | WP_005180518.1 | pilus assembly protein PilM | Machinery gene |
| FSC02_RS13845 (FSC02_13900) | ponA | 2879932..2882508 (+) | 2577 | WP_163170445.1 | penicillin-binding protein PBP1a | - |
| FSC02_RS13850 (FSC02_13905) | - | 2882551..2883354 (-) | 804 | WP_104483911.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23494.92 Da Isoelectric Point: 7.9757
>NTDB_id=390063 FSC02_RS13835 WP_005180516.1 2878067..2878702(-) (pilN) [Acinetobacter indicus strain CMG3-2]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=390063 FSC02_RS13835 WP_005180516.1 2878067..2878702(-) (pilN) [Acinetobacter indicus strain CMG3-2]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTTCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAATCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGTCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTTCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAATCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGTCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |