Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   F7V86_RS12885 Genome accession   NZ_CP044444
Coordinates   2469886..2470077 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus amyloliquefaciens strain KC41     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2464886..2475077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7V86_RS12850 argF 2465737..2466708 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  F7V86_RS12855 - 2466783..2466962 (+) 180 WP_003155070.1 YjzC family protein -
  F7V86_RS12860 - 2466999..2467184 (-) 186 WP_007409129.1 YjzD family protein -
  F7V86_RS12870 - 2467445..2468180 (+) 736 Protein_2442 hypothetical protein -
  F7V86_RS12875 - 2468263..2468829 (+) 567 WP_025649580.1 hypothetical protein -
  F7V86_RS12880 med 2468920..2469873 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  F7V86_RS12885 comZ 2469886..2470077 (+) 192 WP_003155061.1 ComZ family protein Regulator
  F7V86_RS12890 - 2470106..2470324 (-) 219 WP_007409123.1 hypothetical protein -
  F7V86_RS12895 - 2470492..2471430 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  F7V86_RS12900 fabF 2471452..2472690 (+) 1239 WP_151140229.1 beta-ketoacyl-ACP synthase II -
  F7V86_RS12905 - 2472774..2473559 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  F7V86_RS12910 - 2473733..2474719 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=389991 F7V86_RS12885 WP_003155061.1 2469886..2470077(+) (comZ) [Bacillus amyloliquefaciens strain KC41]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=389991 F7V86_RS12885 WP_003155061.1 2469886..2470077(+) (comZ) [Bacillus amyloliquefaciens strain KC41]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment