Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   F4V26_RS02610 Genome accession   NZ_CP044169
Coordinates   496641..497156 (+) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain AR-0414     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 491641..502156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F4V26_RS02585 - 492101..492439 (+) 339 WP_002852397.1 hypothetical protein -
  F4V26_RS02590 cdsA 492448..493173 (+) 726 WP_002869324.1 phosphatidate cytidylyltransferase -
  F4V26_RS02595 dxr 493170..494240 (+) 1071 WP_052797131.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  F4V26_RS02600 - 494242..495636 (+) 1395 WP_002914004.1 M99 family carboxypeptidase catalytic domain-containing protein -
  F4V26_RS02605 tsaD 495633..496640 (+) 1008 WP_002886115.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  F4V26_RS02610 ctsG 496641..497156 (+) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  F4V26_RS02615 - 497156..498395 (+) 1240 Protein_497 DUF2920 family protein -
  F4V26_RS02620 - 498405..500228 (+) 1824 WP_020836874.1 motility associated factor glycosyltransferase family protein -
  F4V26_RS02625 - 500225..502042 (+) 1818 WP_071306812.1 motility associated factor glycosyltransferase family protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=388492 F4V26_RS02610 WP_002799196.1 496641..497156(+) (ctsG) [Campylobacter jejuni strain AR-0414]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=388492 F4V26_RS02610 WP_002799196.1 496641..497156(+) (ctsG) [Campylobacter jejuni strain AR-0414]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment