Detailed information NTG0387884

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FOB62_RS06930
• Genome accession: NZ_CP044102
• Coordinates: 1357310..1358242 (+)
• Length: 310 a.a.
• NCBI ID: WP_138128167.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain FDAARGOS_654
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1352310..1363242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB62_RS06910 (FOB62_06915)	-	1352375..1354030 (+)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-
FOB62_RS06915 (FOB62_06920)	-	1354298..1355212 (+)	915	WP_003052794.1	ABC transporter permease	-
FOB62_RS06920 (FOB62_06925)	-	1355222..1356253 (+)	1032	WP_003058013.1	ABC transporter permease	-
FOB62_RS06925 (FOB62_06930)	oppD	1356265..1357317 (+)	1053	WP_003058019.1	ABC transporter ATP-binding protein	Regulator
FOB62_RS06930 (FOB62_06935)	amiF	1357310..1358242 (+)	933	WP_138128167.1	ATP-binding cassette domain-containing protein	Regulator
FOB62_RS06935 (FOB62_06940)	rnjA	1358421..1360103 (-)	1683	WP_003056700.1	ribonuclease J1	-
FOB62_RS06940 (FOB62_06945)	-	1360105..1360335 (-)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
FOB62_RS06945 (FOB62_06950)	tsaB	1360621..1361319 (+)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FOB62_RS06950 (FOB62_06955)	rimI	1361321..1361746 (+)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
FOB62_RS06955 (FOB62_06960)	tsaD	1361736..1362752 (+)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35153.95 Da
• Isoelectric Point: 6.6437

>NTDB_id=387884 FOB62_RS06930 WP_138128167.1 1357310..1358242(+) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_654]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDINEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=387884 FOB62_RS06930 WP_138128167.1 1357310..1358242(+) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTAATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.426	98.387	0.535
amiF	Streptococcus thermophilus LMG 18311	54.098	98.387	0.532
amiF	Streptococcus salivarius strain HSISS4	53.77	98.387	0.529