Detailed information NTG0038784

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: BATR1942_RS10870
• Genome accession: NC_014639
• Coordinates: 2224102..2226495 (-)
• Length: 797 a.a.
• NCBI ID: WP_003325312.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus 1942
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2219102..2231495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BATR1942_RS10840 (BATR1942_11430)	-	2220159..2220887 (+)	729	WP_003325320.1	amino acid ABC transporter ATP-binding protein	-
BATR1942_RS10845 (BATR1942_11435)	-	2220910..2221737 (+)	828	WP_003325319.1	transporter substrate-binding domain-containing protein	-
BATR1942_RS10850 (BATR1942_11440)	-	2221799..2222449 (+)	651	WP_003325317.1	amino acid ABC transporter permease	-
BATR1942_RS10855 (BATR1942_11445)	-	2222468..2223124 (+)	657	WP_003325316.1	amino acid ABC transporter permease	-
BATR1942_RS20970 (BATR1942_11450)	-	2223162..2223293 (-)	132	WP_003325315.1	YrzQ family protein	-
BATR1942_RS10860 (BATR1942_11455)	-	2223318..2223509 (-)	192	WP_003325314.1	hypothetical protein	-
BATR1942_RS10865 (BATR1942_11460)	-	2223522..2223986 (-)	465	WP_003325313.1	PRC-barrel domain-containing protein	-
BATR1942_RS10870 (BATR1942_11465)	recD2	2224102..2226495 (-)	2394	WP_003325312.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BATR1942_RS10875 (BATR1942_11470)	-	2226529..2227149 (-)	621	WP_087941820.1	tetratricopeptide repeat protein	-
BATR1942_RS10880 (BATR1942_11475)	mnmA	2227240..2228355 (-)	1116	WP_003325310.1	tRNA 2-thiouridine(34) synthase MnmA	-
BATR1942_RS10885 (BATR1942_11480)	-	2228392..2229531 (-)	1140	WP_003325308.1	cysteine desulfurase family protein	-
BATR1942_RS10890 (BATR1942_11485)	cymR	2229550..2229966 (-)	417	WP_003325307.1	cysteine metabolism transcriptional regulator CymR	-
BATR1942_RS10895 (BATR1942_11490)	-	2230169..2231437 (+)	1269	WP_003325306.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89218.95 Da
• Isoelectric Point: 5.2283

>NTDB_id=38784 BATR1942_RS10870 WP_003325312.1 2224102..2226495(-) (recD2) [Bacillus atrophaeus 1942]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEKHS

Nucleotide

• Length: 2394 bp

>NTDB_id=38784 BATR1942_RS10870 WP_003325312.1 2224102..2226495(-) (recD2) [Bacillus atrophaeus 1942]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGGAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCTTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATCGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CTGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTTTTGGCTGCGCCGACAGGAAGAGCGGCAAAACGAATGAGTGAGTCGACCGGACTTCCGGCCGTCAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTTGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCACAGGTCATTCC
GACAGTCAGGCTGACGGATATTTACCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCATGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTT
GAAAAGGTCGTCACCAATGCGCTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACACCATTTGATTTCATGAAAGAAAAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	91.97	100	0.92