Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOB77_RS08265 Genome accession   NZ_CP044091
Coordinates   1541710..1543464 (+) Length   584 a.a.
NCBI ID   WP_000851083.1    Uniprot ID   A0AAW6XX15
Organism   Streptococcus agalactiae strain FDAARGOS_669     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1536710..1548464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB77_RS08250 (FOB77_08250) - 1537312..1539147 (-) 1836 Protein_1505 bifunctional metallophosphatase/5'-nucleotidase -
  FOB77_RS08255 (FOB77_08255) - 1539416..1539856 (+) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator -
  FOB77_RS08260 (FOB77_08260) rcrP 1539903..1541720 (+) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  FOB77_RS08265 (FOB77_08265) rcrQ 1541710..1543464 (+) 1755 WP_000851083.1 ABC transporter ATP-binding protein Regulator
  FOB77_RS08270 (FOB77_08270) - 1543572..1544198 (+) 627 WP_000449636.1 GTP pyrophosphokinase family protein -
  FOB77_RS08275 (FOB77_08275) - 1544200..1544886 (+) 687 WP_001264422.1 response regulator transcription factor -
  FOB77_RS08280 (FOB77_08280) - 1544886..1546115 (+) 1230 WP_000489520.1 HAMP domain-containing sensor histidine kinase -
  FOB77_RS08285 (FOB77_08285) mvk 1546231..1547109 (+) 879 WP_000659719.1 mevalonate kinase -
  FOB77_RS08290 (FOB77_08290) mvaD 1547091..1548035 (+) 945 WP_000348826.1 diphosphomevalonate decarboxylase -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64537.93 Da        Isoelectric Point: 7.4058

>NTDB_id=387692 FOB77_RS08265 WP_000851083.1 1541710..1543464(+) (rcrQ) [Streptococcus agalactiae strain FDAARGOS_669]
MKTKSQKTSFFSNLSPYLKGYKLLFALAIVLATLSSLTTVIGPDRLKEMTDLMVKGLAGNIDLAKIGHIAGQLAVLYVLG
ALVSYLASFIVTTIIQKFAQGMRNAIADKINKIPLSYFDSHTQGDTLSRVTNDVDLMTQSFNQSLVTMVASTVLLIGSLI
MMFKTDWHLATTAIISVFSGFALSSIIMVKSQPLFKKQQMNLANISGYVEEIYSGHNIVTSHNARQQAKSDFQLLNDKLH
SSMWKSQFFSGIMMPLMQFIGNFGYVMVCVVGAMLAIKGTITMGTIVAFMTYVRIFTQPIGQIAQGITQLQSASAAMGRV
FEFLNETNMQEDKHKVLNLPKFKGYVSFEHVKFGYSDNKTIIHDFTSEAQPGQKVAIVGPTGAGKTTIVNLLMRFYDVNS
GSISIDDINIQDMKRSQVHDAFSMVLQDIWLFEGTIKENLIFNQTTISDDEVQEAAKAVGVHHFIMTLPKGYDIVLDDAV
TLSVGQKQLLTIARALLKNSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKDGNIIEQ
GSHDVLMSQSGFYADLYNSQFESA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=387692 FOB77_RS08265 WP_000851083.1 1541710..1543464(+) (rcrQ) [Streptococcus agalactiae strain FDAARGOS_669]
ATGAAAACTAAATCACAAAAAACGTCTTTTTTCTCTAATTTGTCTCCGTACCTCAAAGGTTACAAACTTCTTTTTGCGTT
AGCAATTGTGTTAGCAACTTTATCAAGCTTGACAACAGTTATAGGACCAGACCGTCTTAAAGAGATGACGGATCTTATGG
TAAAAGGCTTGGCTGGTAATATTGACTTAGCCAAAATCGGTCATATTGCAGGGCAATTGGCAGTATTATATGTTTTAGGT
GCATTAGTATCCTATCTAGCAAGTTTTATTGTAACGACTATTATTCAAAAATTTGCTCAAGGCATGCGCAATGCTATTGC
TGATAAAATCAATAAAATACCTTTGAGTTATTTTGATAGCCATACTCAAGGTGATACTTTATCTCGTGTTACAAATGATG
TGGATTTGATGACACAGTCTTTTAACCAAAGTTTAGTTACTATGGTTGCATCTACAGTATTATTGATTGGTTCATTAATT
ATGATGTTCAAAACAGATTGGCATTTAGCAACAACGGCGATTATATCGGTATTTTCAGGATTCGCTCTTTCTTCAATCAT
TATGGTGAAGAGTCAGCCTTTATTTAAAAAGCAACAGATGAATTTGGCTAATATATCTGGATATGTAGAAGAAATTTACT
CAGGACATAACATTGTTACTAGTCATAACGCAAGACAGCAGGCTAAGTCAGATTTTCAACTATTAAATGATAAACTTCAC
AGTTCCATGTGGAAATCACAATTTTTCTCTGGAATTATGATGCCTCTGATGCAGTTTATTGGTAATTTTGGTTATGTGAT
GGTGTGTGTGGTTGGTGCCATGTTAGCTATCAAAGGAACAATTACTATGGGTACAATTGTTGCTTTTATGACCTATGTTC
GTATTTTTACACAGCCTATTGGTCAGATTGCTCAAGGAATTACACAATTACAGTCTGCTAGTGCAGCCATGGGACGTGTT
TTTGAATTTTTAAATGAAACAAATATGCAAGAGGATAAGCACAAAGTGTTAAATCTTCCTAAGTTTAAGGGGTATGTGTC
CTTTGAACATGTCAAGTTTGGTTATAGTGATAACAAGACTATTATTCATGACTTTACTTCGGAGGCACAGCCTGGTCAGA
AAGTTGCTATTGTAGGACCAACTGGCGCAGGTAAAACGACAATTGTTAATTTATTGATGCGTTTTTATGATGTTAATTCA
GGTAGTATTTCCATAGATGACATCAATATCCAAGACATGAAACGTAGTCAAGTTCATGATGCTTTCTCGATGGTTCTTCA
AGATATATGGTTGTTTGAGGGAACTATTAAAGAAAATTTGATTTTTAATCAGACGACAATCAGTGACGATGAGGTTCAAG
AAGCTGCTAAGGCAGTCGGTGTACATCATTTTATAATGACACTACCTAAAGGGTATGATATTGTCCTTGATGACGCTGTG
ACATTGTCAGTTGGACAAAAGCAATTATTAACCATTGCTCGAGCTCTTTTGAAAAATTCTCCCTTACTTATCTTAGATGA
AGCAACTTCATCTGTTGATACACGTACAGAAGAGTTAATTCAAAAAGCTATGGACAAACTTATGGAAGGAAGAACATCAT
TTGTTATCGCACATCGTTTATCAACGATTAAAAACGCAGATTTGATTTTGGTCATGAAAGATGGGAATATCATTGAGCAA
GGCAGTCATGATGTTTTGATGTCTCAAAGTGGTTTTTATGCTGATCTGTATAATTCTCAATTCGAATCAGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(26-299)

ABC transporter (ABC_tran)

(364-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

76.125

98.973

0.753

Multiple sequence alignment