Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   NMBG2136_RS07395 Genome accession   NC_017513
Coordinates   1394253..1395299 (-) Length   348 a.a.
NCBI ID   WP_002216923.1    Uniprot ID   A1KUQ0
Organism   Neisseria meningitidis G2136     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1389253..1400299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBG2136_RS07370 (NMBG2136_1335) - 1390591..1390926 (+) 336 WP_002219073.1 YbaB/EbfC family nucleoid-associated protein -
  NMBG2136_RS07390 (NMBG2136_1336) - 1392903..1393868 (+) 966 WP_002221064.1 IS30-like element IS1655 family transposase -
  NMBG2136_RS07395 (NMBG2136_1337) recA 1394253..1395299 (-) 1047 WP_002216923.1 recombinase RecA Machinery gene
  NMBG2136_RS07400 (NMBG2136_1338) aroD 1395553..1396317 (+) 765 WP_002224578.1 type I 3-dehydroquinate dehydratase -
  NMBG2136_RS07405 (NMBG2136_1339) rep 1396337..1398352 (+) 2016 WP_014580815.1 DNA helicase Rep -
  NMBG2136_RS07410 (NMBG2136_1340) dinB 1398605..1399663 (-) 1059 WP_002221144.1 DNA polymerase IV -
  NMBG2136_RS07415 (NMBG2136_1341) - 1399807..1400214 (-) 408 Protein_1397 fe(3+)-pyochelin receptor -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 37640.89 Da        Isoelectric Point: 4.8330

>NTDB_id=38765 NMBG2136_RS07395 WP_002216923.1 1394253..1395299(-) (recA) [Neisseria meningitidis G2136]
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAV
AQCQKNGGVCAFVDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGN
ETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEID
AKIRALNGIEMHITEGTQDETDGERPEE

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=38765 NMBG2136_RS07395 WP_002216923.1 1394253..1395299(-) (recA) [Neisseria meningitidis G2136]
ATGTCAGACGACAAAAGCAAAGCACTTGCCGCCGCACTGGCGCAAATCGAAAAAAGTTTCGGCAAAGGCGCCATCATGAA
AATGGACGGCAGCCAGCAGGAAGAAAACCTCGAAGTCATTTCCACCGGATCGCTCGGATTAGACCTCGCCCTCGGAGTCG
GCGGTCTGCCGCGCGGGCGCATCGTCGAAATCTTCGGCCCAGAATCCTCCGGCAAAACCACCCTCTGCCTCGAAGCCGTC
GCCCAATGCCAGAAAAACGGCGGCGTGTGCGCCTTTGTCGATGCCGAACACGCCTTCGATCCCGTTTACGCCCGCAAACT
CGGCGTAAAAGTCGAAGAGCTTTACCTGTCCCAGCCCGATACCGGCGAACAGGCTTTGGAAATCTGCGACACACTCGTCC
GTTCGGGCGGCATAGATATGGTAGTCGTCGATTCCGTAGCCGCACTCGTCCCCAAAGCCGAAATCGAAGGCGATATGGGG
GACAGCCATGTCGGACTGCAGGCGCGCCTGATGAGCCAGGCTTTGCGCAAACTGACCGGACACATCAAAAAAACCAACAC
GCTGGTTGTGTTCATCAACCAAATCCGGATGAAGATCGGCGTAATGTTCGGCAGCCCCGAGACCACGACCGGCGGCAACG
CGCTGAAATTCTATTCTTCCGTCCGCCTCGACATCCGCCGCACCGGATCCATCAAAAAAGGTGAAGAAGTATTGGGCAAC
GAAACCCGCGTCAAAGTCATCAAAAACAAAGTCGCGCCGCCGTTCCGTCAGGCAGAGTTTGACATCCTCTACGGAGAAGG
CATCAGTTGGGAAGGCGAATTGATCGACATCGGCGTGAAAAACGACATCATCAACAAATCCGGCGCGTGGTACAGCTACA
ACGGCGCGAAAATCGGTCAGGGCAAAGACAACGTCCGCGTCTGGCTGAAGGAAAATCCCGAAATTGCCGACGAAATCGAC
GCAAAAATCCGCGCCCTCAACGGCATAGAAATGCACATCACCGAAGGGACGCAGGACGAAACCGACGGCGAACGCCCCGA
AGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A1KUQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Neisseria gonorrhoeae MS11

99.425

100

0.994

  recA Neisseria gonorrhoeae strain FA1090

99.425

100

0.994

  recA Ralstonia pseudosolanacearum GMI1000

74.468

94.54

0.704

  recA Vibrio cholerae O1 biovar El Tor strain E7946

67.232

100

0.684

  recA Vibrio cholerae strain A1552

67.232

100

0.684

  recA Glaesserella parasuis strain SC1401

67.521

100

0.681

  recA Pseudomonas stutzeri DSM 10701

71.692

93.391

0.67

  recA Acinetobacter nosocomialis M2

66.097

100

0.667

  recA Acinetobacter baylyi ADP1

66.571

99.713

0.664

  recA Acinetobacter baumannii D1279779

65.805

100

0.658

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

65.689

97.989

0.644

  recA Staphylococcus aureus strain ATCC 12600

65.487

97.414

0.638

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

67.378

94.253

0.635

  recA Helicobacter pylori 26695

67.385

93.391

0.629

  recA Helicobacter pylori strain NCTC11637

67.077

93.391

0.626

  recA Streptococcus mutans UA159

60.969

100

0.615

  recA Bacillus subtilis subsp. subtilis str. 168

65.138

93.966

0.612

  recA Streptococcus pneumoniae R36A

59.091

100

0.598

  recA Streptococcus pneumoniae Rx1

59.091

100

0.598

  recA Streptococcus pneumoniae D39

59.091

100

0.598

  recA Streptococcus pneumoniae R6

59.091

100

0.598

  recA Streptococcus pneumoniae TIGR4

59.091

100

0.598

  recA Streptococcus thermophilus LMD-9

59.827

99.425

0.595

  recA Streptococcus thermophilus LMG 18311

59.827

99.425

0.595

  recA Streptococcus mitis NCTC 12261

59.884

98.851

0.592

  recA Latilactobacillus sakei subsp. sakei 23K

62.997

93.966

0.592

  recA Streptococcus pyogenes NZ131

61.963

93.678

0.58

  recA Streptococcus mitis SK321

60.606

94.828

0.575

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.121

95.115

0.572

  recA Lactococcus lactis subsp. cremoris KW2

60.303

94.828

0.572


Multiple sequence alignment