Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   FZN58_RS06635 Genome accession   NZ_CP043763
Coordinates   1288511..1289026 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain BfR-CA-14430     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1283511..1294026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZN58_RS06620 (FZN58_06620) - 1283614..1285431 (-) 1818 WP_149831545.1 motility associated factor glycosyltransferase family protein -
  FZN58_RS06625 (FZN58_06625) - 1285428..1287260 (-) 1833 WP_149831547.1 motility associated factor glycosyltransferase family protein -
  FZN58_RS06630 (FZN58_06630) - 1287270..1288511 (-) 1242 WP_002864247.1 DUF2920 family protein -
  FZN58_RS06635 (FZN58_06635) ctsG 1288511..1289026 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  FZN58_RS06640 (FZN58_06640) tsaD 1289027..1290034 (-) 1008 WP_002886115.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  FZN58_RS06645 (FZN58_06645) - 1290031..1291425 (-) 1395 WP_057033759.1 M99 family carboxypeptidase catalytic domain-containing protein -
  FZN58_RS06650 (FZN58_06650) dxr 1291427..1292497 (-) 1071 WP_057033758.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  FZN58_RS06655 (FZN58_06655) cdsA 1292494..1293219 (-) 726 WP_057033757.1 phosphatidate cytidylyltransferase -
  FZN58_RS06660 (FZN58_06660) - 1293228..1293566 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=385751 FZN58_RS06635 WP_002799196.1 1288511..1289026(-) (ctsG) [Campylobacter jejuni strain BfR-CA-14430]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=385751 FZN58_RS06635 WP_002799196.1 1288511..1289026(-) (ctsG) [Campylobacter jejuni strain BfR-CA-14430]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment