Detailed information NTG0383759

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: HC659_RS13695
• Genome accession: NZ_CP051465
• Coordinates: 2652791..2654056 (+)
• Length: 421 a.a.
• NCBI ID: WP_019712521.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain UCMB5121
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2647791..2659056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HC659_RS13675 (HC659_26950)	yrrB	2649163..2649783 (-)	621	WP_237957762.1	tetratricopeptide repeat protein	-
HC659_RS13680 (HC659_26960)	mnmA	2649869..2650984 (-)	1116	WP_032677111.1	tRNA 2-thiouridine(34) synthase MnmA	-
HC659_RS13685 (HC659_26970)	iscSA	2651012..2652154 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
HC659_RS13690 (HC659_26980)	cymR	2652173..2652589 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
HC659_RS13695 (HC659_26990)	rarA	2652791..2654056 (+)	1266	WP_019712521.1	replication-associated recombination protein A	Machinery gene
HC659_RS13700 (HC659_27000)	tcdA	2654098..2654862 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
HC659_RS13710 (HC659_27030)	aspS	2655198..2656976 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
HC659_RS13715 (HC659_27040)	hisS	2656990..2658264 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
HC659_RS13720 (HC659_27050)	yrzK	2658646..2658816 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46493.38 Da
• Isoelectric Point: 7.1665

>NTDB_id=383759 HC659_RS13695 WP_019712521.1 2652791..2654056(+) (rarA) [Bacillus subtilis subsp. subtilis strain UCMB5121]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVCIDDQAMEHFANGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=383759 HC659_RS13695 WP_019712521.1 2652791..2654056(+) (rarA) [Bacillus subtilis subsp. subtilis strain UCMB5121]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTATGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATGCATTGATGATCAGGCGATGGAGCATTTTGCCAACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993