Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   SP670_RS14340 Genome accession   NC_014498
Coordinates   1864701..1865732 (-) Length   343 a.a.
NCBI ID   WP_000506424.1    Uniprot ID   A0A0B7LYB2
Organism   Streptococcus pneumoniae 670-6B     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1859701..1870732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SP670_RS10010 (SP670_1989) - 1859848..1860609 (-) 762 WP_001107757.1 SDR family oxidoreductase -
  SP670_RS10015 (SP670_1990) ytpR 1860642..1861268 (-) 627 WP_000578309.1 YtpR family tRNA-binding protein -
  SP670_RS10020 (SP670_1991) - 1861284..1861601 (-) 318 WP_000615767.1 thioredoxin family protein -
  SP670_RS10025 (SP670_1992) - 1861598..1861897 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  SP670_RS14335 - 1862095..1862175 (-) 81 WP_223200442.1 hypothetical protein -
  SP670_RS10030 (SP670_1993) - 1862182..1862373 (-) 192 WP_000291826.1 cell wall-binding protein -
  SP670_RS10035 (SP670_1994) - 1862534..1863208 (-) 675 WP_000725720.1 LiaF transmembrane domain-containing protein -
  SP670_RS10040 (SP670_1995) - 1863213..1863659 (-) 447 WP_000776596.1 LytTR family DNA-binding domain-containing protein -
  SP670_RS10045 (SP670_1996) - 1863773..1864276 (-) 504 WP_000800928.1 phosphatase PAP2 family protein -
  SP670_RS10050 (SP670_1997) - 1864273..1864635 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  SP670_RS14340 (SP670_1998) rcrQ 1864701..1865732 (-) 1032 WP_000506424.1 ABC transporter ATP-binding protein Regulator
  SP670_RS14345 (SP670_1999) rcrP 1865739..1866560 (-) 822 WP_000601692.1 ABC transporter permease Regulator
  SP670_RS10065 (SP670_2000) - 1866577..1867047 (-) 471 WP_000360547.1 MarR family winged helix-turn-helix transcriptional regulator -
  SP670_RS10070 (SP670_2001) - 1867171..1867887 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  SP670_RS10075 (SP670_2002) ply 1868768..1870183 (-) 1416 WP_001284359.1 cholesterol-dependent cytolysin pneumolysin -
  SP670_RS10080 (SP670_2003) - 1870194..1870604 (-) 411 WP_000595762.1 hypothetical protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 37918.12 Da        Isoelectric Point: 4.4764

>NTDB_id=38346 SP670_RS14340 WP_000506424.1 1864701..1865732(-) (rcrQ) [Streptococcus pneumoniae 670-6B]
MGFLLMGALFIVLPRTMVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTV
AFIGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTTIVNLLMKFYEIDKGSIHI
DGVDTKAMTRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVG
QKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEE
LMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=38346 SP670_RS14340 WP_000506424.1 1864701..1865732(-) (rcrQ) [Streptococcus pneumoniae 670-6B]
ATGGGCTTCCTTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCTAAGCGGATTAATCAAGTTTT
AGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTGCAGCTGACTGATGAAAACTTCAAAGGTCAGGTCGAGTTTAAGG
ATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATGTTAGCTTTAAAGCAGAAACTGGTCAAACAGTG
GCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGA
AATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGACAGCTCATGCTGGTCAAAAGGTTGCCATTGTTG
GGCCGACTGGGACTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGGGAAGTATTCACATT
GATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATACCTGGCTCTT
TGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAGTGATGAACGAATGATGGAAGCTAGTAAGGCTG
TGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCATCTTGGATGACACCGTGACCTTGTCTGTAGGA
CAAAAACAACTATTGACTATTGCTCGTGCCCTTCTTAAGGATGCACCGCTTTTGATTTTGGATGAGGCGACTTCTTCTGT
TGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCATTGCCCACC
GCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAGCAAGGCAACTATGAGGAA
CTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGATGAAGCAGAAGAATAA

Domains


Predicted by InterproScan.

(120-265)

(68-118)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LYB2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

80.804

65.306

0.528

  rcrP Streptococcus mutans UA159

37.861

100

0.382


Multiple sequence alignment