Detailed information NTG0038333

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R2866_RS05625
• Genome accession: NC_017451
• Coordinates: 1143670..1145010 (-)
• Length: 446 a.a.
• NCBI ID: WP_005647247.1
• Uniprot ID: -
• Organism: Haemophilus influenzae R2866
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1138670..1150010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R2866_RS05605 (R2866_1119)	-	1139016..1140536 (-)	1521	WP_005668309.1	Na+/H+ antiporter NhaC family protein	-
R2866_RS05610 (R2866_1120)	-	1140979..1141383 (+)	405	WP_005647241.1	H-NS family nucleoid-associated regulatory protein	-
R2866_RS05615 (R2866_1121)	purU	1141453..1142289 (+)	837	WP_005668313.1	formyltetrahydrofolate deformylase	-
R2866_RS05620 (R2866_1122)	aroA	1142289..1143587 (+)	1299	WP_005647246.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
R2866_RS05625 (R2866_1123)	rarA	1143670..1145010 (-)	1341	WP_005647247.1	replication-associated recombination protein A	Machinery gene
R2866_RS05630 (R2866_1124)	lolA	1145071..1145688 (-)	618	WP_005647249.1	outer membrane lipoprotein chaperone LolA	-
R2866_RS05635 (R2866_1125)	-	1145706..1148474 (-)	2769	WP_005668317.1	DNA translocase FtsK	-
R2866_RS05640 (R2866_1126)	lrp	1148476..1148955 (-)	480	WP_005664572.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50219.03 Da
• Isoelectric Point: 6.3312

>NTDB_id=38333 R2866_RS05625 WP_005647247.1 1143670..1145010(-) (rarA) [Haemophilus influenzae R2866]
MSNLNFDFAENDFRPLAARMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=38333 R2866_RS05625 WP_005647247.1 1143670..1145010(-) (rarA) [Haemophilus influenzae R2866]
ATGTCGAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCAAGAATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCATTGCGAAAAGCTATCCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGACCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGCATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCATATTGAAGATGGAA
CTGTTATTTTCATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGTGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGAGACCCTTTATATGTTGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTCGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGAGAGCGAGCCATCGCCCAAGCCATTATTTATCTTGCGGTAGCACCAAAAAGTAATGC
CGTTTATACTGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTGCCAGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATGGTGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.48	94.843	0.374