Detailed information
Bioinformatically predicted
Overview
| Name | comGH | Type | Machinery gene |
| Locus tag | GRB95_RS01110 | Genome accession | NZ_CP051004 |
| Coordinates | 190555..191529 (+) | Length | 324 a.a. |
| NCBI ID | WP_001008570.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae 515 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 185555..196529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GRB95_RS01075 (GRB95_01075) | - | 186534..186899 (+) | 366 | WP_000285373.1 | DUF1033 family protein | - |
| GRB95_RS01080 (GRB95_01080) | comGA | 187072..188043 (+) | 972 | WP_000250808.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GRB95_RS01085 (GRB95_01085) | comGB | 187937..188980 (+) | 1044 | WP_223295592.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GRB95_RS01090 (GRB95_01090) | comGD | 188977..189405 (+) | 429 | WP_000793381.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GRB95_RS01095 (GRB95_01095) | comGE | 189377..189676 (+) | 300 | WP_001867089.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| GRB95_RS01100 (GRB95_01100) | comGF | 189630..190091 (+) | 462 | WP_001874060.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GRB95_RS01105 (GRB95_01105) | comGG | 190069..190440 (+) | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| GRB95_RS01110 (GRB95_01110) | comGH | 190555..191529 (+) | 975 | WP_001008570.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GRB95_RS01115 (GRB95_01115) | - | 191561..192754 (+) | 1194 | WP_000047535.1 | acetate kinase | - |
| GRB95_RS01120 (GRB95_01120) | - | 192905..193111 (+) | 207 | WP_000798242.1 | helix-turn-helix transcriptional regulator | - |
| GRB95_RS01125 (GRB95_01125) | - | 193170..193307 (+) | 138 | WP_001867090.1 | hypothetical protein | - |
| GRB95_RS01130 (GRB95_01130) | - | 193348..193803 (+) | 456 | WP_000905674.1 | hypothetical protein | - |
| GRB95_RS01135 (GRB95_01135) | - | 193872..194537 (+) | 666 | WP_000008111.1 | type II CAAX endopeptidase family protein | - |
| GRB95_RS01140 (GRB95_01140) | proC | 194558..195328 (-) | 771 | WP_001867096.1 | pyrroline-5-carboxylate reductase | - |
| GRB95_RS01145 (GRB95_01145) | pepA | 195398..196465 (-) | 1068 | WP_001281321.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37100.99 Da Isoelectric Point: 4.4041
>NTDB_id=382564 GRB95_RS01110 WP_001008570.1 190555..191529(+) (comGH) [Streptococcus agalactiae 515]
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
Nucleotide
Download Length: 975 bp
>NTDB_id=382564 GRB95_RS01110 WP_001008570.1 190555..191529(+) (comGH) [Streptococcus agalactiae 515]
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCCGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAATTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCCGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAATTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGH | Streptococcus mutans UA159 |
66.984 |
97.222 |
0.651 |
| comGH | Streptococcus mutans UA140 |
66.984 |
97.222 |
0.651 |