Detailed information NTG0380377

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FXO17_RS10385
• Genome accession: NZ_CP043052
• Coordinates: 2170769..2171584 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain AP43
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2165769..2176584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FXO17_RS10355 (FXO17_10355)	-	2166077..2166517 (-)	441	WP_002121449.1	SRPBCC family protein	-
FXO17_RS10360 (FXO17_10360)	tadA	2166588..2167091 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
FXO17_RS10365 (FXO17_10365)	hibch	2167097..2168221 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
FXO17_RS10370 (FXO17_10370)	ung	2168218..2168931 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
FXO17_RS10375 (FXO17_10375)	-	2168985..2169581 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
FXO17_RS10380 (FXO17_10380)	gspK	2169809..2170768 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
FXO17_RS10385 (FXO17_10385)	xcpW	2170769..2171584 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FXO17_RS10390 (FXO17_10390)	xcpV	2171584..2171964 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
FXO17_RS10395 (FXO17_10395)	-	2171954..2172508 (-)	555	WP_002121405.1	type II secretion system protein	-
FXO17_RS10400 (FXO17_10400)	-	2172515..2173123 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
FXO17_RS10405 (FXO17_10405)	ycfH	2173160..2173933 (-)	774	WP_002121462.1	TatD family hydrolase	-
FXO17_RS10410 (FXO17_10410)	pilZ	2173951..2174292 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
FXO17_RS10415 (FXO17_10415)	holB	2174303..2175283 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
FXO17_RS10420 (FXO17_10420)	kdsB	2175297..2176058 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=380377 FXO17_RS10385 WP_002121460.1 2170769..2171584(-) (xcpW) [Acinetobacter pittii strain AP43]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=380377 FXO17_RS10385 WP_002121460.1 2170769..2171584(-) (xcpW) [Acinetobacter pittii strain AP43]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738