Detailed information NTG0378877

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BAA1790NC_RS08465
• Genome accession: NZ_CP042841
• Coordinates: 1790692..1791393 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ATCC BAA-1790
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1785692..1796393

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAA1790NC_RS08430 (BAA1790NC_1660)	kdsB	1786215..1786976 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
BAA1790NC_RS08435 (BAA1790NC_1661)	-	1786988..1787968 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
BAA1790NC_RS08440 (BAA1790NC_1662)	-	1787980..1788321 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
BAA1790NC_RS08445 (BAA1790NC_1663)	-	1788339..1789112 (+)	774	WP_000497298.1	TatD family hydrolase	-
BAA1790NC_RS08450 (BAA1790NC_1664)	-	1789150..1789758 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BAA1790NC_RS08455 (BAA1790NC_1665)	-	1789768..1790322 (+)	555	WP_000841373.1	type II secretion system protein	-
BAA1790NC_RS08460 (BAA1790NC_1666)	xcpV	1790312..1790692 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BAA1790NC_RS08465 (BAA1790NC_1667)	xcpW	1790692..1791393 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BAA1790NC_RS08470 (BAA1790NC_1668)	gspK	1791393..1792352 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
BAA1790NC_RS08475 (BAA1790NC_1669)	-	1792583..1793179 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
BAA1790NC_RS08480 (BAA1790NC_1670)	ung	1793230..1793943 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
BAA1790NC_RS08485 (BAA1790NC_1671)	-	1793940..1795064 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
BAA1790NC_RS08490 (BAA1790NC_1672)	tadA	1795071..1795574 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
BAA1790NC_RS08495 (BAA1790NC_1673)	-	1795644..1796087 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=378877 BAA1790NC_RS08465 WP_000594589.1 1790692..1791393(+) (xcpW) [Acinetobacter baumannii strain ATCC BAA-1790]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=378877 BAA1790NC_RS08465 WP_000594589.1 1790692..1791393(+) (xcpW) [Acinetobacter baumannii strain ATCC BAA-1790]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996