Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HB753_RS04345 Genome accession   NZ_CP050270
Coordinates   858742..860487 (+) Length   581 a.a.
NCBI ID   WP_002283054.1    Uniprot ID   -
Organism   Streptococcus mutans strain S4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 853742..865487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB753_RS04325 (HB753_04325) glyA 854150..855412 (+) 1263 WP_002282524.1 serine hydroxymethyltransferase -
  HB753_RS04330 (HB753_04330) - 855409..856386 (+) 978 WP_002264268.1 nucleoid-associated protein -
  HB753_RS04335 (HB753_04335) - 856388..857002 (+) 615 WP_002262260.1 lysozyme family protein -
  HB753_RS04340 (HB753_04340) - 857012..858745 (+) 1734 WP_002262261.1 ABC transporter ATP-binding protein -
  HB753_RS04345 (HB753_04345) rcrQ 858742..860487 (+) 1746 WP_002283054.1 ABC transporter ATP-binding protein Regulator
  HB753_RS04350 (HB753_04350) - 860618..862333 (-) 1716 WP_002264266.1 phospho-sugar mutase -
  HB753_RS04355 (HB753_04355) - 862428..863000 (-) 573 WP_002262264.1 ECF transporter S component -
  HB753_RS04360 (HB753_04360) coaC 863075..863614 (-) 540 WP_019804779.1 phosphopantothenoylcysteine decarboxylase -
  HB753_RS04365 (HB753_04365) - 863607..864293 (-) 687 WP_019804778.1 phosphopantothenate--cysteine ligase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65273.90 Da        Isoelectric Point: 9.3147

>NTDB_id=377640 HB753_RS04345 WP_002283054.1 858742..860487(+) (rcrQ) [Streptococcus mutans strain S4]
MKARNNKNTLKRLTADFLKQRILVFLALLGTLIQVSLTVYLPVLIGQAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLTYNRLVFTYSQELRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMAKL
DFFMMILVLVLTPLSLFVARFIAQKSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVTQYTKPFNDISAVLSELQSALACAERLYMILD
EKDAKDDGKKELVSESVKGAIAFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYPEASREQVIAAAKAANADFFIKQLPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=377640 HB753_RS04345 WP_002283054.1 858742..860487(+) (rcrQ) [Streptococcus mutans strain S4]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGACTGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTCTAATTGGGCAAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATCAATCCCTTGACTTACAATCGTTTGGTTTTCACTTATAGCCAGGAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTAATGGTTTTTAATCAGTTTTTCGTAGGTATTTTGACTATTTTGTTAACCATCATAACAATGGCGAAGCTA
GACTTTTTTATGATGATTTTGGTACTGGTCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGAGCATTTACTCAACATATTGAGGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGCTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGT
GCTATTTTCTATTCATCTACAGTCAATCCCGCGACACGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCACTCAATATACCAAAC
CCTTTAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTTTATATGATTCTTGAT
GAAAAGGATGCTAAGGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAAGGTGCTATTGCCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAAGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGATTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGCTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATCCTGAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAACTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAGCTTATGAAAGGACGGACCAGCTTTATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.225

100

0.386