Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | FGL79_RS05670 | Genome accession | NZ_CP042389 |
| Coordinates | 1100811..1101341 (+) | Length | 176 a.a. |
| NCBI ID | WP_155275694.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain CBA3617 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1095811..1106341
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL79_RS05650 (FGL79_05650) | hemH | 1096678..1097391 (+) | 714 | WP_311732756.1 | ferrochelatase | - |
| FGL79_RS05655 (FGL79_05655) | - | 1097501..1098589 (+) | 1089 | WP_004270225.1 | glycosyltransferase family 4 protein | - |
| FGL79_RS05660 (FGL79_05660) | - | 1098614..1099276 (-) | 663 | WP_039099348.1 | YigZ family protein | - |
| FGL79_RS05665 (FGL79_05665) | comFA | 1099333..1100667 (+) | 1335 | WP_100069772.1 | DEAD/DEAH box helicase | Machinery gene |
| FGL79_RS05670 (FGL79_05670) | comFC | 1100811..1101341 (+) | 531 | WP_155275694.1 | ComF family protein | Machinery gene |
| FGL79_RS05675 (FGL79_05675) | hpf | 1101467..1102012 (+) | 546 | WP_004270226.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| FGL79_RS05680 (FGL79_05680) | secA | 1102241..1104604 (+) | 2364 | WP_004270228.1 | preprotein translocase subunit SecA | - |
| FGL79_RS05685 (FGL79_05685) | prfB | 1104676..1105792 (+) | 1117 | WP_099048118.1 | peptide chain release factor 2 | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 20695.83 Da Isoelectric Point: 9.7337
>NTDB_id=377598 FGL79_RS05670 WP_155275694.1 1100811..1101341(+) (comFC) [Latilactobacillus curvatus strain CBA3617]
MTTQGVCPDCQRWQQLYPGEQFTNRALLTYNEPMQQYFQRYKGQGDYRLRHVFQRLIRENFPVQRQTAYIPVPTDPTHLQ
SRGFNPVVGLYEDCFPLTPLLQKLPTEKGQAQKNRAERLATPQFFKCAQNMLLGSKVQQLILLDDIYTTGRTLWHAQQCL
RKRYQTLPIHAITLVH
MTTQGVCPDCQRWQQLYPGEQFTNRALLTYNEPMQQYFQRYKGQGDYRLRHVFQRLIRENFPVQRQTAYIPVPTDPTHLQ
SRGFNPVVGLYEDCFPLTPLLQKLPTEKGQAQKNRAERLATPQFFKCAQNMLLGSKVQQLILLDDIYTTGRTLWHAQQCL
RKRYQTLPIHAITLVH
Nucleotide
Download Length: 531 bp
>NTDB_id=377598 FGL79_RS05670 WP_155275694.1 1100811..1101341(+) (comFC) [Latilactobacillus curvatus strain CBA3617]
ATGACAACCCAGGGGGTGTGTCCGGATTGCCAGAGATGGCAGCAACTGTATCCAGGCGAACAATTTACTAATCGAGCGTT
GTTAACATACAACGAACCAATGCAACAGTATTTTCAACGCTATAAGGGACAGGGGGATTATCGATTACGTCACGTATTTC
AACGGCTGATTCGAGAAAATTTTCCTGTGCAACGGCAAACGGCGTATATCCCAGTCCCGACTGATCCAACACATTTGCAA
AGCCGCGGATTCAATCCGGTGGTAGGCTTATACGAGGACTGTTTTCCACTGACCCCATTGTTGCAGAAGCTACCAACTGA
AAAAGGACAAGCACAAAAAAATCGTGCAGAGCGCTTAGCAACGCCGCAATTTTTTAAATGCGCGCAGAACATGCTGTTGG
GTTCCAAGGTGCAACAGTTAATTTTGTTGGATGATATTTATACCACTGGGCGCACGTTATGGCATGCTCAGCAGTGTCTC
CGCAAGCGATACCAAACGCTGCCAATTCACGCAATTACTTTAGTCCACTAG
ATGACAACCCAGGGGGTGTGTCCGGATTGCCAGAGATGGCAGCAACTGTATCCAGGCGAACAATTTACTAATCGAGCGTT
GTTAACATACAACGAACCAATGCAACAGTATTTTCAACGCTATAAGGGACAGGGGGATTATCGATTACGTCACGTATTTC
AACGGCTGATTCGAGAAAATTTTCCTGTGCAACGGCAAACGGCGTATATCCCAGTCCCGACTGATCCAACACATTTGCAA
AGCCGCGGATTCAATCCGGTGGTAGGCTTATACGAGGACTGTTTTCCACTGACCCCATTGTTGCAGAAGCTACCAACTGA
AAAAGGACAAGCACAAAAAAATCGTGCAGAGCGCTTAGCAACGCCGCAATTTTTTAAATGCGCGCAGAACATGCTGTTGG
GTTCCAAGGTGCAACAGTTAATTTTGTTGGATGATATTTATACCACTGGGCGCACGTTATGGCATGCTCAGCAGTGTCTC
CGCAAGCGATACCAAACGCTGCCAATTCACGCAATTACTTTAGTCCACTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Latilactobacillus sakei subsp. sakei 23K |
65.493 |
80.682 |
0.528 |