Detailed information NTG0037728

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: HPSA_RS05460
• Genome accession: NC_017361
• Coordinates: 1161589..1162362 (+)
• Length: 257 a.a.
• NCBI ID: WP_000449232.1
• Uniprot ID: -
• Organism: Helicobacter pylori SouthAfrica7
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1156589..1167362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSA_RS05455 (HPSA_05640)	hopL	1157889..1161569 (+)	3681	WP_000591241.1	Hop family outer membrane protein HopL	-
HPSA_RS05460 (HPSA_05645)	proC	1161589..1162362 (+)	774	WP_000449232.1	pyrroline-5-carboxylate reductase	Machinery gene
HPSA_RS05465 (HPSA_05650)	fic	1162390..1162923 (+)	534	WP_000549868.1	protein adenylyltransferase Fic	-
HPSA_RS05470 (HPSA_05660)	ybeY	1163280..1163702 (-)	423	WP_000889641.1	rRNA maturation RNase YbeY	-
HPSA_RS05475 (HPSA_05665)	-	1163754..1164248 (-)	495	WP_000516030.1	flavodoxin	-
HPSA_RS05480 (HPSA_05670)	-	1164338..1164919 (-)	582	WP_014534845.1	DedA family protein	-
HPSA_RS05485 (HPSA_05675)	ccoS	1165040..1165231 (+)	192	WP_001090941.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
HPSA_RS05490 (HPSA_05680)	-	1165250..1166221 (+)	972	WP_001071041.1	NAD(P)-binding domain-containing protein	-

Sequence

Protein

• Length: 257 a.a.
• Molecular weight: 28260.71 Da
• Isoelectric Point: 8.0482

>NTDB_id=37728 HPSA_RS05460 WP_000449232.1 1161589..1162362(+) (proC) [Helicobacter pylori SouthAfrica7]
METLQFIGYGNMAQAILEGSHEILSKRFILEITGRNPEKIAPFLQEKNIQAHIVHYKDAINVHEKFVFLLFKPYNLKDFN
YQGQAKSVLSALAGVNFEALSNAIDSSHYLKCMPNIASKFALSSTAVCEKSVAPLISEKALSIIKSFGSCVRVSNEEQVD
SSVTTNGSALAFLSLVASSLKDAGIREGLNAKDSLELVKMSFKGFAKLLEQERPEMITEQICTPKGVTIEGLSVLEKRGV
RGAFIEACHESVKKMRP

Nucleotide

• Length: 774 bp

>NTDB_id=37728 HPSA_RS05460 WP_000449232.1 1161589..1162362(+) (proC) [Helicobacter pylori SouthAfrica7]
ATGGAAACTTTGCAATTCATTGGATATGGGAATATGGCTCAAGCGATTTTGGAAGGCTCGCATGAAATTTTATCCAAGCG
TTTTATTTTAGAAATCACCGGGAGAAACCCTGAAAAAATCGCCCCCTTTTTACAAGAAAAAAACATTCAAGCTCACATCG
TGCATTACAAAGACGCTATTAATGTGCATGAAAAATTCGTGTTTTTACTTTTTAAGCCTTATAACCTTAAGGATTTTAAC
TATCAAGGTCAGGCTAAAAGCGTTTTGAGCGCTTTAGCTGGCGTGAATTTTGAAGCCTTAAGCAATGCGATTGATTCTTC
ACATTACCTCAAATGCATGCCCAATATCGCAAGCAAATTCGCCCTTTCTTCTACGGCAGTGTGCGAAAAATCAGTTGCAC
CTTTGATAAGCGAGAAGGCTTTGAGCATCATTAAAAGCTTTGGGAGTTGCGTGCGAGTGAGTAATGAAGAGCAGGTTGAT
TCTAGCGTTACAACGAATGGGAGCGCGCTCGCTTTTTTAAGTTTAGTAGCGAGCAGTTTGAAAGACGCCGGCATTAGAGA
GGGCCTGAACGCTAAAGATTCTTTAGAATTAGTGAAAATGAGTTTTAAGGGCTTTGCCAAGCTTTTAGAACAAGAGCGCC
CTGAAATGATTACAGAGCAAATTTGCACCCCTAAAGGCGTAACGATTGAGGGCTTGAGCGTTTTAGAAAAAAGGGGGGTT
AGGGGAGCGTTTATAGAAGCTTGCCATGAAAGCGTGAAAAAAATGCGCCCCTAA

Domains

Predicted by InterProScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (156-255)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	37.945	98.444	0.374