Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   HBA50_RS08550 Genome accession   NZ_CP050133
Coordinates   1724028..1726361 (-) Length   777 a.a.
NCBI ID   WP_045499732.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1719028..1731361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS08520 (HBA50_08520) - 1719492..1720823 (-) 1332 WP_045498505.1 sodium:alanine symporter family protein -
  HBA50_RS08525 (HBA50_08525) trxA 1721171..1721485 (-) 315 WP_045498501.1 thioredoxin -
  HBA50_RS08530 (HBA50_08530) - 1721576..1721983 (-) 408 WP_003074623.1 polyketide cyclase -
  HBA50_RS08535 (HBA50_08535) - 1722084..1722830 (-) 747 WP_045498498.1 LysR family transcriptional regulator -
  HBA50_RS08540 (HBA50_08540) - 1722939..1723457 (+) 519 WP_045498496.1 DUF4865 family protein -
  HBA50_RS08545 (HBA50_08545) trxA 1723619..1723933 (-) 315 WP_045498489.1 thioredoxin -
  HBA50_RS08550 (HBA50_08550) mutS/mutS2 1724028..1726361 (-) 2334 WP_045499732.1 endonuclease MutS2 Machinery gene
  HBA50_RS08555 (HBA50_08555) - 1726431..1726982 (-) 552 WP_045498487.1 CvpA family protein -
  HBA50_RS08560 (HBA50_08560) zapA 1726982..1727284 (-) 303 WP_045498485.1 cell division protein ZapA -
  HBA50_RS08565 (HBA50_08565) - 1727360..1727770 (-) 411 WP_045498482.1 GNAT family N-acetyltransferase -
  HBA50_RS08570 (HBA50_08570) - 1727980..1728765 (-) 786 WP_045498476.1 ABC transporter permease -
  HBA50_RS08575 (HBA50_08575) - 1728767..1729585 (-) 819 WP_045498470.1 ABC-2 family transporter protein -
  HBA50_RS08580 (HBA50_08580) - 1729587..1730579 (-) 993 WP_045498468.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87568.80 Da        Isoelectric Point: 5.4645

>NTDB_id=376947 HBA50_RS08550 WP_045499732.1 1724028..1726361(-) (mutS/mutS2) [Streptococcus cristatus ATCC 51100]
MNHKILETLEFDKIKELFSPYLLTELGELELKQLQPNSKKESIAAAFLEMSDMRQIFVQHPHFSLGAIQDIRGLTKRLEL
ESDLNIEEFLALKRVLAVTHELVSFYEDLENVQLERLDRLFNNLVEFPSIQGSLQAINDGGFLESFASEELSRIRRRIQE
NEVQVRDILQEILKTKGDMLADQVVASRNGRNVLPVKNTYRNRVAGVVHDISASGSTVYIEPRAVVNLNEEIASSRADER
YEIQRILQAMSDMIRPHAAEIANNAWIIGHLDLVRAKVRFMQETGAVVPDLSEEQDIQLLSVRHPLIENAVANDLHFGSD
LTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD
SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFMQGVPG
RSNAFEIARRLGLSEVIVGHAQEQTDTDSDVNRIIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEIIEAKAQLKKLAPATVDLSKNKVLKQAKKNRAPKVGDDILVTSY
GQRGTLVKQLKDGRWEAQVGLIKMTLEEQEFNLLKTEKEQQPKRKQVNVVKRTNTKGPRARLDLRGKRYEEAMEELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKQAKSFGYAPQNAGGSGATIVIFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=376947 HBA50_RS08550 WP_045499732.1 1724028..1726361(-) (mutS/mutS2) [Streptococcus cristatus ATCC 51100]
ATGAATCATAAAATTTTAGAAACTTTGGAATTTGATAAAATTAAGGAGCTTTTTTCTCCCTATCTACTGACTGAGCTGGG
AGAGTTGGAGTTGAAGCAGCTCCAGCCAAACAGTAAAAAAGAATCAATTGCTGCTGCTTTTTTGGAAATGTCTGATATGC
GGCAGATTTTTGTGCAACACCCGCACTTTAGTTTGGGAGCCATTCAGGATATTAGGGGCTTGACCAAGCGCTTGGAGCTG
GAGAGCGACTTGAATATTGAGGAGTTTTTAGCTCTCAAGCGGGTTTTAGCTGTGACACACGAGCTGGTGTCCTTCTACGA
GGATCTGGAAAATGTCCAATTGGAGCGTTTGGATCGCCTTTTTAACAATCTAGTAGAGTTTCCTAGTATTCAGGGAAGCC
TGCAAGCTATCAATGATGGAGGCTTTCTCGAAAGTTTTGCTAGTGAAGAGTTGAGTCGTATTCGCCGGAGAATCCAAGAA
AATGAAGTTCAGGTTCGGGATATTCTGCAAGAAATTCTCAAAACTAAGGGAGACATGCTGGCGGACCAAGTGGTGGCCAG
CCGGAACGGCCGCAATGTACTGCCTGTGAAAAATACCTACCGTAACCGTGTTGCGGGTGTCGTTCACGATATTTCGGCCA
GCGGAAGTACGGTTTACATTGAGCCGCGGGCGGTGGTCAATCTCAATGAAGAGATTGCTAGCAGTCGGGCAGACGAGCGC
TATGAAATTCAGCGGATTTTGCAGGCTATGTCGGATATGATACGGCCACATGCGGCTGAAATTGCCAACAATGCTTGGAT
TATCGGTCATCTAGATCTGGTGCGTGCCAAGGTCCGCTTCATGCAGGAGACGGGAGCGGTGGTGCCAGACCTGTCAGAAG
AGCAGGATATCCAACTACTCAGTGTCCGCCATCCCCTGATTGAAAATGCAGTGGCTAATGACCTGCATTTCGGATCAGAC
TTGACAGAGATTGTCATTACCGGGCCAAATACCGGTGGTAAGACCATCATGCTGAAGACCTTGGGGCTAGCTCAGATCAT
GGCCCAATCAGGTCTGCCGATTTTGGCGGACAAGGGGAGTCGCGTCGGGATTTTCAGTCAGATTTTTGCAGACATTGGTG
ATGAGCAGTCCATTGAGCAGAGCCTATCGACTTTCTCCAGTCACATGACTAATATCGTCTCTATTTTGGAGCAAGTTGAT
AGTGAGAGCCTGGTTCTGCTGGATGAGCTGGGAGCTGGGACTGACCCGCAAGAAGGAGCAGCTCTGGCTATTGCCATCTT
GGAAGATTTACGGCTAAGGCAGATTAAAACCATGGCGACGACCCACTATCCTGAGCTCAAAGCTTATGGGATTGAGACGG
ACTGGGTGGAAAATGCCAGCATGGAATTTGATACAGATAGTTTGCGGCCGACCTATCGCTTTATGCAGGGAGTGCCTGGC
CGCTCCAATGCCTTTGAAATTGCTCGGCGTTTGGGCTTGTCGGAAGTTATCGTTGGCCACGCCCAAGAGCAGACCGACAC
AGACAGTGATGTCAATCGGATCATTGAGCGCCTAGAGGAGCAGACGCTGGAAAGCCGTAAGCGCTTGGATAATATCCGTG
AGGTGGAGCAGGAAAATCTCAAATTTAACAGAGCCCTCAAAAAACTTTACAATGAGTTTAACCGAGAAAAGGAAACCGAG
CTCAATAAGGCGCGATTGGAGGCTCAGGAAATCGTTGATTTGGCTTTGTCAGAAAGCGAGAGCATTCTCAAAAATCTCCA
TGACAAGTCCAGTCTTAAACCGCATGAGATTATTGAAGCCAAGGCTCAGCTTAAAAAGTTGGCGCCAGCAACCGTTGATT
TATCAAAGAATAAGGTGCTCAAGCAGGCCAAGAAAAATCGGGCGCCCAAGGTGGGAGATGATATCCTAGTCACCAGCTAT
GGTCAGCGGGGAACCTTGGTCAAGCAGCTCAAGGACGGACGCTGGGAAGCTCAGGTCGGTCTTATCAAGATGACACTAGA
AGAGCAGGAGTTCAACTTACTCAAGACTGAAAAGGAGCAGCAACCTAAGCGCAAGCAGGTCAATGTGGTCAAGCGAACCA
ATACCAAAGGTCCAAGAGCCAGACTAGATCTGCGTGGCAAACGCTATGAAGAGGCTATGGAGGAGCTCGATGCCTTTATC
GATCAGGCCCTTCTCAACAACATGGCTCAGGTGGACATTATCCACGGTATTGGAACAGGTGTCATCCGTGAAGGAGTAAC
CAAATACCTCCGTCGGAACAAGCAGGCCAAGTCCTTCGGCTATGCTCCGCAAAATGCTGGTGGTAGCGGTGCAACGATTG
TGATATTTAAGTAG

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-668)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.417

100

0.4

Multiple sequence alignment