Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HBA50_RS06115 Genome accession   NZ_CP050133
Coordinates   1222521..1224257 (-) Length   578 a.a.
NCBI ID   WP_045499588.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1217521..1229257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS06100 (HBA50_06100) - 1217634..1219808 (+) 2175 WP_045499595.1 ABC transporter substrate-binding protein/permease -
  HBA50_RS06105 (HBA50_06105) - 1219808..1220548 (+) 741 WP_005590533.1 amino acid ABC transporter ATP-binding protein -
  HBA50_RS06110 (HBA50_06110) - 1220919..1222445 (+) 1527 WP_045499591.1 ATP-binding cassette domain-containing protein -
  HBA50_RS06115 (HBA50_06115) rcrQ 1222521..1224257 (-) 1737 WP_045499588.1 ABC transporter ATP-binding protein Regulator
  HBA50_RS06120 (HBA50_06120) - 1224247..1225989 (-) 1743 WP_045499585.1 ABC transporter ATP-binding protein -
  HBA50_RS06125 (HBA50_06125) - 1226086..1227273 (-) 1188 WP_045499581.1 MFS transporter -
  HBA50_RS06130 (HBA50_06130) asnS 1227429..1228775 (-) 1347 WP_045499578.1 asparagine--tRNA ligase -
  HBA50_RS06135 (HBA50_06135) - 1228796..1229161 (-) 366 WP_045499575.1 VOC family protein -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64415.27 Da        Isoelectric Point: 6.3506

>NTDB_id=376917 HBA50_RS06115 WP_045499588.1 1222521..1224257(-) (rcrQ) [Streptococcus cristatus ATCC 51100]
MKHKKSSSSLRRLTRDLLQARWLFVLASLGTVAQVALTVLLPVLIGNAVDSVLLPQAEQHLMPILGQMLLVILANTLIQW
LNPLLYNQLVYRYSQQLRQGVIKKVHYLPLAYLDRQGTGDLVSRVTTDLEQLSNGLLMVFNQFFVGLLTILVTIISMARL
DFFLLLLVLLLTPLSLFLASFIAKKSFSFFQRQTQARGAQTQLIEESLTQESLIQAFNAQEQFDTAFTRSNQTYADYSQA
AIFYSSTVNPSTRFINALIYALIVGFGAVRIIQGTGFTVGQLVTFLNYVNQYTKPFNDISSVMSELQSALACAERIYSVL
DQEEIAESGQEILQSEDVRGQISFEHVAFGYESGKELIQDLNIRIPAASKVAIVGPTGAGKSTLINLLMRFYNVDSGLIS
LDDVPISHYTRASYRQQFGMVLQETWLKTATIHDNIAFGRPDASREEVIAAAKAANAHFFIQQLPQGYDTYLADAGDSLS
QGQRQLLTIARVFLAVPKILILDEATSSIDTRTEVLIQEAFSKLMVGRTSFIIAHRLSTIQNADIILVMVDGNIVEHGNH
QELMAARGVYYQMQTAQE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=376917 HBA50_RS06115 WP_045499588.1 1222521..1224257(-) (rcrQ) [Streptococcus cristatus ATCC 51100]
ATGAAGCATAAGAAATCATCTAGCAGCTTGAGGCGTTTGACTCGAGATTTGCTGCAGGCGCGCTGGCTCTTTGTCCTAGC
TAGTCTGGGAACGGTGGCTCAAGTAGCTCTGACTGTTCTTCTCCCAGTTTTAATTGGAAATGCGGTTGATAGCGTTCTTC
TCCCTCAAGCGGAGCAACATTTGATGCCGATCTTGGGCCAGATGCTGCTGGTTATTTTAGCCAATACGCTGATTCAGTGG
CTCAATCCCTTGCTCTATAATCAGCTGGTCTATCGCTACAGTCAGCAGCTCCGACAGGGCGTTATCAAGAAAGTACACTA
TCTGCCTTTGGCCTATCTGGATCGGCAGGGAACCGGTGACTTGGTTAGTCGGGTGACGACGGACTTGGAGCAGCTTAGCA
ATGGCCTGCTTATGGTTTTCAATCAATTTTTTGTGGGTTTGCTGACAATTTTAGTGACCATCATTAGCATGGCCAGATTG
GACTTTTTCCTCCTGCTTTTGGTTTTGCTTTTGACGCCCCTTTCTCTTTTCTTGGCGAGCTTTATAGCTAAAAAGAGTTT
TAGCTTTTTCCAACGTCAGACGCAGGCAAGAGGAGCGCAGACCCAGCTGATTGAGGAAAGTTTGACCCAGGAAAGTTTGA
TTCAGGCTTTTAATGCTCAGGAGCAGTTTGATACAGCTTTTACTCGCAGTAATCAAACCTATGCTGACTATTCTCAGGCG
GCTATTTTCTATTCTTCGACGGTCAATCCTTCGACTCGTTTTATCAATGCCCTGATCTATGCTTTGATTGTGGGCTTTGG
GGCTGTCCGAATCATTCAGGGAACAGGCTTTACGGTTGGGCAGCTGGTAACTTTTCTCAACTACGTCAACCAGTACACCA
AGCCTTTCAACGATATATCGTCAGTCATGTCAGAATTGCAGAGCGCTTTAGCTTGTGCAGAGCGGATTTACAGCGTTTTG
GACCAAGAAGAAATAGCAGAGTCTGGTCAGGAAATCCTCCAGTCTGAAGATGTCAGAGGACAGATTAGCTTTGAGCATGT
GGCTTTTGGCTATGAGTCCGGCAAAGAGCTGATTCAGGATTTGAATATAAGGATTCCAGCAGCTAGTAAGGTTGCTATTG
TCGGGCCAACTGGTGCTGGTAAGTCAACCCTGATCAATCTCCTCATGCGCTTTTACAATGTAGACAGTGGTCTTATTTCG
CTAGACGATGTTCCCATCAGTCATTACACCAGAGCTTCTTATCGTCAGCAGTTCGGTATGGTACTACAGGAGACTTGGCT
CAAGACGGCAACCATTCATGATAACATAGCTTTTGGCCGGCCAGACGCCAGCCGAGAAGAGGTTATTGCAGCTGCCAAGG
CGGCCAATGCGCATTTCTTTATCCAGCAGTTGCCTCAGGGCTATGACACCTATCTGGCGGATGCTGGGGACTCCCTGTCT
CAAGGTCAGCGCCAGCTATTAACCATCGCGCGCGTCTTCCTGGCTGTTCCTAAAATCCTAATCTTGGATGAAGCGACTTC
CTCCATTGATACCCGGACAGAAGTCTTGATTCAGGAGGCTTTCAGCAAGCTCATGGTGGGTCGTACTAGCTTTATCATCG
CCCATCGCCTGTCTACTATTCAAAATGCTGACATCATCCTCGTCATGGTAGATGGCAATATCGTCGAACATGGGAATCAC
CAGGAGCTCATGGCAGCCAGAGGTGTTTATTACCAAATGCAGACGGCGCAGGAGTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(28-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.567

100

0.391