Detailed information NTG0375873

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FPQ37_RS15480
• Genome accession: NZ_CP042164
• Coordinates: 3244474..3245628 (+)
• Length: 384 a.a.
• NCBI ID: WP_039346088.1
• Uniprot ID: -
• Organism: Burkholderia contaminans strain ZCC
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3239474..3250628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPQ37_RS15450 (FPQ37_15450)	-	3240117..3240722 (+)	606	WP_039346059.1	50S ribosomal protein L25/general stress protein Ctc	-
FPQ37_RS15455 (FPQ37_15455)	pth	3240844..3241443 (+)	600	WP_039346068.1	aminoacyl-tRNA hydrolase	-
FPQ37_RS15460 (FPQ37_15460)	hisC	3241558..3242625 (+)	1068	WP_039346080.1	histidinol-phosphate transaminase	-
FPQ37_RS15465 (FPQ37_15465)	-	3242709..3242975 (-)	267	WP_039346082.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FPQ37_RS15470 (FPQ37_15470)	coaD	3243035..3243532 (-)	498	WP_039346084.1	pantetheine-phosphate adenylyltransferase	-
FPQ37_RS15475 (FPQ37_15475)	rsmD	3243644..3244258 (-)	615	WP_039346086.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FPQ37_RS15480 (FPQ37_15480)	pilA	3244474..3245628 (+)	1155	WP_039346088.1	signal recognition particle-docking protein FtsY	Machinery gene
FPQ37_RS15485 (FPQ37_15485)	maiA	3245714..3246358 (-)	645	WP_039346506.1	maleylacetoacetate isomerase	-
FPQ37_RS15490 (FPQ37_15490)	ybiB	3246547..3247521 (+)	975	WP_039346089.1	DNA-binding protein YbiB	-
FPQ37_RS15495 (FPQ37_15495)	leuA	3247902..3249548 (+)	1647	WP_039346090.1	2-isopropylmalate synthase	-
FPQ37_RS15500 (FPQ37_15500)	-	3249692..3250075 (-)	384	WP_039346091.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40942.88 Da
• Isoelectric Point: 4.7979

>NTDB_id=375873 FPQ37_RS15480 WP_039346088.1 3244474..3245628(+) (pilA) [Burkholderia contaminans strain ZCC]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPAVEAPPVADVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRTGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=375873 FPQ37_RS15480 WP_039346088.1 3244474..3245628(+) (pilA) [Burkholderia contaminans strain ZCC]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAGCCGTCCGACGCGCCCGCGGTCGAGGCCCCGCCTGTGGCCGACGTGCCGCAAGCGCCCGCACAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATCACCGG
CGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCACCGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCAGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCAGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCTGCGATCGCGCGTCAGCGTCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.581